Factsheet for GSMUA_Achr1P21290_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
cytosol 1
extracellular 2
endoplasmic reticulum 4
vacuole 2
plasma membrane 2
golgi 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	65.2	65.42
EER91017	Sorghum	endoplasmic reticulum, golgi	63.34	63.78
Os03t0707900-01	Rice	plasma membrane	62.33	62.97
KRH41841	Soybean	endoplasmic reticulum	62.5	62.61
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	63.51	62.46
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	61.82	62.24
KRH60539	Soybean	extracellular	61.32	61.84
Solyc03g118690.2.1	Tomato	plastid	61.49	61.69
PGSC0003DMT400014757	Potato	endoplasmic reticulum	61.32	61.53
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	60.98	61.39
AT3G17970.1	Thale cress	endoplasmic reticulum	60.3	60.61
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	59.46	60.07
CDX75952	Canola	endoplasmic reticulum	58.78	58.98
Bra001692.1-P	Field mustard	endoplasmic reticulum	58.61	58.71
CDY51926	Canola	endoplasmic reticulum	58.45	58.54
Bra018737.1-P	Field mustard	mitochondrion	57.43	56.57
CDX93679	Canola	mitochondrion	56.93	56.07
CDY40591	Canola	endoplasmic reticulum, golgi	56.59	55.83
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	40.03	53.62
HORVU4Hr1G006870.1	Barley	plastid	57.26	51.99
GSMUA_Achr9P14860_001	Banana	mitochondrion	50.34	47.83
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	32.09	45.45
CDX95800	Canola	endoplasmic reticulum	58.45	45.23
CDX92180	Canola	endoplasmic reticulum	58.78	43.61
GSMUA_Achr9P09040_001	Banana	plastid	17.4	17.79
GSMUA_Achr2P20550_001	Banana	mitochondrion	18.92	15.62
GSMUA_Achr4P18300_001	Banana	cytosol	10.14	15.08
GSMUA_Achr4P18290_001	Banana	plastid	5.57	12.64

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	Gene3D:3.90.1300.10	MapMan:35.1	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536
GO:GO:0009941	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0031359	EnsemblPlantsGene:GSMUA_Achr1G21290_001
EnsemblPlants:GSMUA_Achr1P21290_001	EnsemblPlants:GSMUA_Achr1T21290_001	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036928
UniProt:M0S1T7	PFAM:PF01425	PFAM:PF07719	PFAM:PF13414	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR11895	PANTHER:PTHR11895:SF39	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_2	InterPro:TPR_repeat	UniParc:UPI00029618DC	SEG:seg

Description

toc64, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G21290_001]

Coordinates

chr1:+:16026720..16036226

Molecular Weight (calculated)

64586.8 Da

IEP (calculated)

8.436

GRAVY (calculated)

-0.089

Length

592 amino acids

Sequence
(BLAST)

001: MPSPYGPSSN LWVLLGLGVA SIFIMTRRMR RRALKEDFGA FVERLQLLPP PPPAPPKAPH PLSGLTFAVA DIFDIEGYVT GFGNLDWART HESAARTAPI
101: ILALVDGGAT CIGKTIIDEL AYGMSGENKH YDTPTNPTVP ERVPGGCSSG SAVAVASGLA EFSLGVDTIG GVRIPGAYCG ILAFRPSYAA VSTLGFVPVS
201: PSLDTIGFFS KDPNVLRRVA YLLIQAPYSG LRQPRNIFIA DDCFELLKIP TSRVTRVLIN SVEKLFGKKL LKHLNLGDYL STKLPSLKQL QNGKKNGDSK
301: STLLSLAKAM QSLFNHEFRN NHEEWISSTK PALDPFISAQ INRLADDSLA LDCCQSAREE SRLALNALLK DEGILVLPTV LGLPPKLNAK ELSSEDYLNH
401: TFCLSAIASM SGCCQVTIPL GLFEKCPVSV SFIARHGGDH LLLDTIQTMY AILQEQADIA SKSNFSKSSI TNEESAEIAK EKGNVAYKDK QWQKAISLYT
501: EAIKLNGKNA TYYSNRAAAY LELGSYLQAE ADCSSAINLD KKNVKAYLRR GTAREMLGYY KEAIEDFKYA LVLEPTNKTA NLASNRLKQL FQ

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.