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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX95800 Canola endoplasmic reticulum 90.48 94.38
CDY51926 Canola endoplasmic reticulum 68.05 91.88
CDX75952 Canola endoplasmic reticulum 67.67 91.53
AT3G17970.1 Thale cress endoplasmic reticulum 65.79 89.13
CDX93679 Canola mitochondrion 59.02 78.37
CDY40591 Canola endoplasmic reticulum, golgi 58.4 77.67
VIT_17s0000g02400.t01 Wine grape endoplasmic reticulum 52.88 71.53
Solyc03g118690.2.1 Tomato plastid 49.75 67.29
KRH41841 Soybean endoplasmic reticulum 49.5 66.84
PGSC0003DMT400014757 Potato endoplasmic reticulum 49.37 66.78
KRH60539 Soybean extracellular 49.0 66.61
Os03t0707900-01 Rice plasma membrane 44.61 60.75
TraesCS4D01G040700.1 Wheat endoplasmic reticulum 43.73 59.35
EER91017 Sorghum endoplasmic reticulum, golgi 43.48 59.01
GSMUA_Achr1P21290_001 Banana endoplasmic reticulum 43.61 58.78
TraesCS4A01G270900.1 Wheat endoplasmic reticulum 43.23 58.67
Zm00001d033682_P001 Maize endoplasmic reticulum, golgi, plasma membrane 43.48 57.64
TraesCS4B01G043200.1 Wheat endoplasmic reticulum 41.98 57.17
CDY21581 Canola cytosol 38.35 50.75
CDX69906 Canola cytosol, plastid 38.22 50.58
Zm00001d013463_P001 Maize golgi, plasma membrane, vacuole 27.44 49.55
HORVU4Hr1G006870.1 Barley plastid 39.47 48.31
CDY22653 Canola cytosol 25.19 47.63
CDY06342 Canola cytosol 25.06 47.39
CDY03602 Canola cytosol, plastid 16.17 42.16
CDY46509 Canola cytosol 4.14 18.23
CDY31318 Canola cytosol 12.78 16.64
CDY59872 Canola plastid 11.03 16.36
CDY04173 Canola plastid 10.9 16.17
CDY46805 Canola cytosol 12.28 16.04
CDX84527 Canola cytosol 12.28 15.91
CDY58262 Canola cytosol 12.03 15.58
CDX69905 Canola mitochondrion 5.64 14.42
CDX98979 Canola plastid 10.28 12.63
CDX70030 Canola plastid 10.03 12.36
Protein Annotations
KEGG:00970+6.3.5.7Gene3D:1.25.40.10MapMan:11.1.2.1.2Gene3D:2.60.40.150MapMan:23.1.2.4Gene3D:3.90.1300.10
GO:A0A078DSC2InterPro:AS_sfInterPro:AmidaseInterPro:Amidase_domInterPro:C2_domInterPro:C2_domain_sf
EnsemblPlants:CDX92180ProteinID:CDX92180ProteinID:CDX92180.1GO:GO:0003674GO:GO:0003824GO:GO:0004040
GO:GO:0005488GO:GO:0005515GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00153882001InterPro:IPR000008InterPro:IPR011990
InterPro:IPR013026InterPro:IPR019734InterPro:IPR035892InterPro:IPR036928PFAM:PF00168PFAM:PF01425
PFAM:PF07719PFAM:PF13414PFscan:PS50004PFscan:PS50005PFscan:PS50293PANTHER:PTHR11895
PANTHER:PTHR11895:SF39MetaCyc:PWY-5921SMART:SM00028SMART:SM00239SUPFAM:SSF48452SUPFAM:SSF49562
SUPFAM:SSF75304SignalP:SignalP-noTMTMHMM:TMhelixInterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_2
InterPro:TPR_repeatUniParc:UPI0004EE577ESEG:seg:::
Description
BnaA05g22270D
Coordinates
chrLK031871:+:654437..659799
Molecular Weight (calculated)
87791.5 Da
IEP (calculated)
8.545
GRAVY (calculated)
-0.209
Length
798 amino acids
Sequence
(BLAST)
001: MASHASNLWV LLGLGIAGIL LAAKKLKKTI REDFGAFIDK LLLLPPPQPA PPKAPHPLTG LSFAISDVFD VTGYVTGFGH PDWVRTHEAA SSTCPVVSTL
101: VEGGATCVGK TVVDELAFSI SGENKHYESS TNPAAHDRIP GGASSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSQGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL HLPFATQRNP RQIIVADDYF QLLKIPVDRI TQVVTKSAEK LFGKQSLKHQ SLENYIESKV PSLKEFTRTK AIANTKVPTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI GPVISSQVCD NAELTNEEIE NLNTIRNQTR VAINSLLKDD GVLVIPTMPT LPPKLGSKEI ISEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPVSVSF LARHGGDRFL LDTVQTMYAS LQENSSIIAD PKSSKKTISL EESAEIAKEK GNQAFKEKQW QKAIGLYSEA
501: IKLSENNATY YSNRAAAYLE IGSFLLAEED CTKAITLDKK NVKAYLRRGT AREMLGEYKE AMDDFRHALV LEPNNKRASL SAERLRKVFQ YTLRESSPKM
601: ESKYYRCNGV LAFTKIGFPK LTFILNNGYR NSRSSSNQCE VRIRIKRGVN LAVRDINSSD PYVVVKMGKQ KLKTRVINKD VNPEWNEDLT LSVTDPTLTV
701: LLTVYDHDMF SKDDKMGDAE FEIKPYIEAL KMHLDGLPSG TIVTTVQPCR RNCLAEESKV TWVDGKLVQD LVLRLRHVEC GEVEAQLQWI DLPGSKGL
Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)
001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ
Arabidopsis Description
OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.