CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70030	Canola	plastid	96.76	97.06
AT5G07360.1	Thale cress	plastid	89.83	88.47
VIT_15s0024g00980.t01	Wine grape	cytosol	61.48	73.21
VIT_00s0283g00010.t01	Wine grape	mitochondrion	18.95	71.51
Solyc06g068690.2.1	Tomato	extracellular	60.86	67.87
KRH41039	Soybean	mitochondrion	50.85	67.62
VIT_15s0024g01020.t01	Wine grape	cytosol	58.4	66.73
KRH59711	Soybean	plasma membrane	63.02	66.07
VIT_15s0024g01010.t01	Wine grape	endoplasmic reticulum, golgi	63.48	65.92
PGSC0003DMT400036918	Potato	plastid	61.17	63.62
Solyc03g118030.2.1	Tomato	plastid	60.55	62.98
TraesCS3B01G379500.5	Wheat	golgi, vacuole	60.55	61.7
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	60.25	61.38
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	60.25	61.0
Zm00001d052660_P002	Maize	mitochondrion	61.63	60.88
KXG28572	Sorghum	golgi	61.48	60.55
Os11t0536800-01	Rice	golgi, plastid	61.02	59.19
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	60.25	58.8
CDY04173	Canola	plastid	16.64	20.07
CDY59872	Canola	plastid	16.64	20.07
CDY46509	Canola	cytosol	5.08	18.23
CDY22653	Canola	cytosol	11.56	17.77
CDY06342	Canola	cytosol	11.56	17.77
CDY58262	Canola	cytosol	16.8	17.69
CDX84527	Canola	cytosol	16.8	17.69
CDY46805	Canola	cytosol	16.64	17.68
CDY31318	Canola	cytosol	16.64	17.62
CDY21581	Canola	cytosol	15.41	16.58
CDX69906	Canola	cytosol, plastid	15.25	16.42
CDY03602	Canola	cytosol, plastid	6.93	14.71
CDY40591	Canola	endoplasmic reticulum, golgi	12.33	13.33
CDX93679	Canola	mitochondrion	12.33	13.31
CDX75952	Canola	endoplasmic reticulum	12.02	13.22
CDY51926	Canola	endoplasmic reticulum	11.71	12.86
CDX95800	Canola	endoplasmic reticulum	12.17	10.33
CDX92180	Canola	endoplasmic reticulum	12.63	10.28
CDX69905	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	GO:A0A078EDU6	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	EnsemblPlants:CDX98979	ProteinID:CDX98979	ProteinID:CDX98979.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00107098001	InterPro:IPR036928	PFAM:PF01425	PANTHER:PTHR11895
PANTHER:PTHR11895:SF73	MetaCyc:PWY-5921	SUPFAM:SSF75304	SignalP:SignalP-noTM	UniParc:UPI0004EEC205	SEG:seg

Description

BnaC09g48560D

Coordinates

chrLK031907:+:975326..978432

Molecular Weight (calculated)

71769.4 Da

IEP (calculated)

8.030

GRAVY (calculated)

-0.201

Length

649 amino acids

Sequence
(BLAST)

001: MVAPQITTCD PTIRPCLLTR GSPPRTRTCA PLLLLLLGLT VSLTVANPSC ESSVSMVRNC KQLWKILDRK VSVPRRRITT SPSNITQTEL PDKTMEAKCL
101: QSMFELIDSG FFNETKIQEI ANGATEMNLP IYRTNRKLVA TKNGGLENPS PLVFNASWNR EVPRAQAKRF NYPSLSGVRL PENEEDIAFM SVLELGELIK
201: TKQVTSKELV RIYLKRLKRY NHVLESVVTY TEELAYKQAK EADDLLSQGT YLGPLHGIPY GLKDIVAVPG YKTTWGSTSF KDQVLDIEAW VYRRLKASGA
301: VLVAKLVTGS LAYDDIWFGG RTRNPWNIEE FSTGSSAGPA ASTSAGMVPF AIGSETAGSM TYPAARCGVT AFRPTFGSVG RTGVMSLSES LDKLGPFCRT
401: AADCAVVLDA IKGKDPDDLS SREIAFVDPF SVDITKLTVG YTKDADMKVV EVLGSKGVNM VPFELNYTVD SVQGILNFTM DVDMLAHFDE WQRTGQEDLY
501: EAQDQWPVEL RRARVVTAVD YIQAQRARGK LIREVEKSFI VDAFIGNVTD WEKVCMGNLV GLPVLVIPTG FKNISEPPPT KSCRRRTTIN AGIYAPPERD
601: HIALALGMAY QSVTDAHKRR PPVDDLGPDD SIPNPPRAII PPRRLHIHE

Best Arabidopsis Sequence Match ( AT5G07360.3 )
(BLAST)

001: MARPSIATCD PSARPCLATR GSLPRSRTCA PLLFLCLLLG LTVFCADANP SDSKLLCSRL LPCEPSIEMV RNCKNLWKLL DRKVSVPCRK ITTLTRTVTL
101: TELPDKTMEA KCLQGMFELI DSAFFNETKL QEIAKGATEM NVPIYRANRK LVATKNGGLE NPSPLVFNPS WNREVQRVQD KRFKYPSASG VKLPRDEEDI
201: AFMSVLELGE LIKTRQITSK ELVRIYLKQL KRYNHVLEAV VTYTEELAYK QAKEADDLLS QGTYLGPLHG IPYGLKDIVA VPGYKTTWGS TSFKDQFLDI
301: EAWVYKRLKA SGAVLVAKLV TGSMAYDDIW FGGRTRNPWN IEEFSTGSSA GPAASTSAGM VPFAIGSETA GSMTYPAARC GITALRPTFG SVGRTGVMSI
401: SESLDKLGPF CRTAADCAVI LDAIKGKDPD DLSSREIAFE DPFSVDITKL TVGYTKDADM KVVEVLGSKG VNMVPFELNY TVESVQGILN FTMDVDMLAH
501: FDEWQRTGQE DLYEAQDQWP VELRRARVVT AVDYIQAQRA RGKLIREVEK SFTVDAFIGN VTDWEKVCMG NLVGLPVLVI PTGFKNITDP PTNSCRRRTT
601: INAGIYAPPE RDHIALALGM AYQSVTDAHR KRPPIDDLGP DDSIPNPPRA LIPPRRLHI

Arabidopsis Description

Amidase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6N3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.