Factsheet for HORVU3Hr1G088210.5

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	89.17	93.09
TraesCS3B01G379500.5	Wheat	golgi, vacuole	88.57	92.46
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	88.87	92.2
KXG28572	Sorghum	golgi	76.54	77.24
Os11t0536800-01	Rice	golgi, plastid	77.59	77.13
Zm00001d052660_P002	Maize	mitochondrion	72.93	73.82
VIT_15s0024g00980.t01	Wine grape	cytosol	58.5	71.38
VIT_00s0283g00010.t01	Wine grape	mitochondrion	18.35	70.93
KRH41039	Soybean	mitochondrion	48.72	66.39
VIT_15s0024g01020.t01	Wine grape	cytosol	55.79	65.32
Solyc06g068690.2.1	Tomato	extracellular	56.84	64.95
VIT_15s0024g01010.t01	Wine grape	endoplasmic reticulum, golgi	60.75	64.64
KRH59711	Soybean	plasma membrane	59.7	64.14
PGSC0003DMT400036918	Potato	plastid	57.74	61.54
Solyc03g118030.2.1	Tomato	plastid	56.84	60.58
CDX70030	Canola	plastid	58.65	60.28
Bra009269.1-P	Field mustard	plastid	58.65	60.28
CDX98979	Canola	plastid	58.8	60.25
AT5G07360.1	Thale cress	plastid	58.5	59.03
HORVU5Hr1G093800.2	Barley	mitochondrion, plastid	12.63	22.83
HORVU6Hr1G060680.1	Barley	cytosol	4.81	20.13
HORVU2Hr1G115000.1	Barley	cytosol, plastid	16.84	20.11
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	17.14	18.72
HORVU4Hr1G019600.11	Barley	cytosol	16.39	18.02
HORVU2Hr1G126540.1	Barley	cytosol	5.71	11.18
HORVU6Hr1G078210.1	Barley	mitochondrion	9.17	10.93
HORVU4Hr1G006870.1	Barley	plastid	9.77	9.97

Protein Annotations

EnsemblPlants:HORVU3Hr1G088210.5	EnsemblPlantsGene:HORVU3Hr1G088210	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928	KEGG:00970+6.3.5.7
PANTHER:PTHR11895	PANTHER:PTHR11895:SF73	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF75304
TMHMM:TMhelix	UniParc:UPI000B45FF93	UniProt:A0A287M535	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr3H:+:624100566..624105148

Molecular Weight (calculated)

73438.8 Da

IEP (calculated)

7.379

GRAVY (calculated)

-0.189

Length

665 amino acids

Sequence
(BLAST)

001: MRIPRGHRRP PPCLHLLFLL AALCSAVLKT AAAAAPRTAG GTGGGDIASV TGIMTWAAWP PKCTWLPLPM SGKSHSFTLV SKYHKIWKDT KDVISAKDIS
101: RKEPVSGVIA LKESMKFFDA DFFNDSKLRE MEDGAKEFNV PAFRENRRLV ALKNGGLHDP SVLVFKSSWG SESKVKESET FDYPQASMIH RPSNDEDIAF
201: MSIIEFGELI RTKKITSREL TDVFLRRLKR YGAVLESVIT YTEDLAYKQA KEADDLLEQG KYLGPLHGIP YGLKDIIAVP QYNTTWGSKT FKNQAIDMEA
301: FVYKRLKSAG AVLVAKLVTG SLAYDDIWFG GRTRNPWNIE EFSTGSSAGP TASTSAGMVP FAIGSETAGS ITYPAARCGV TALRPSFGTV ARTGVMSLSE
401: SLDKLGPFCR SAADCAIVLD AIRGADADDP SSREIALEDP FHLDITKLTV GYLDSAEMEV VNVLSTKGAK LVPFKLNYTV KSVQSILNIT MDVDMLAHFD
501: SWQREGHDDD YEAQDQWPVE LRRARLVPAV DYVQVMYQEN QTLTILFHCI RASLSLLWSS DEQAQRARGR LIREVRESFT VDAFIGNATD WELVCLGNLV
601: GLPIVVVPTG FKSIENPPKG NTRRRTTVTT GIYAPPDRDH VALALAMAYQ SVTDHHKQRP PIDAN

Best Arabidopsis Sequence Match ( AT5G07360.1 )
(BLAST)

001: MARPSIATCD PSARPCLATR GSLPRSRTCA PLLFLCLLLG LTVFCADANP SDSKLLCSRL LPCEPSIEMV RNCKNLWKLL DRKVSVPCRK ITTLTRTVTL
101: TELPDKTMEA KCLQGMFELI DSAFFNETKL QEIAKGATEM NVPIYRANRK LVATKNGGLE NPSPLVFNPS WNREVQRVQD KRFKYPSASG VKLPRDEEDI
201: AFMSVLELGE LIKTRQITSK ELVRIYLKQL KRYNHVLEAV VTYTEELAYK QAKEADDLLS QGTYLGPLHG IPYGLKDIVA VPGYKTTWGS TSFKDQFLDI
301: EAWVYKRLKA SGAVLVAKLV TGSMAYDDIW FGGRTRNPWN IEEFSTGSSA GPAASTSAGM VPFAIGSETA GSMTYPAARC GITALRPTFG SVGRTGVMSI
401: SESLDKLGPF CRTAADCAVI LDAIKGKDPD DLSSREIAFE DPFSVDITKL TVGYTKDADM KVVEVLGSKG VNMVPFELNY TVESVQGILN FTMDVDMLAH
501: FDEWQRTGQE DLYEAQDQWP VELRRARVVT AVDYIQAQRA RGKLIREVEK SFTVDAFIGN VTDWEKVCMG NLVGLPVLVI PTGFKNITDP PTNSCRRRTT
601: INAGIYAPPE RDHIALALGM AYQSVTDAHR KRPPIDDLGP DDSIPNPPRA LIPPRRLHI

Arabidopsis Description

Amidase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6N3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.