Factsheet for HORVU5Hr1G093800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026512.1-P	Field mustard	cytosol	27.45	55.8
CDY46509	Canola	cytosol	27.45	55.8
KRG98874	Soybean	mitochondrion	67.66	52.42
Solyc10g007840.2.1	Tomato	plastid	74.73	51.98
KRH46093	Soybean	mitochondrion	76.63	51.93
VIT_12s0028g01330.t01	Wine grape	mitochondrion	76.09	51.28
AT3G25660.1	Thale cress	plastid	74.18	50.84
CDY04173	Canola	plastid	73.91	50.56
CDY59872	Canola	plastid	73.91	50.56
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	56.52	50.24
HORVU2Hr1G115000.1	Barley	cytosol, plastid	66.58	43.99
HORVU6Hr1G060680.1	Barley	cytosol	9.78	22.64
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	29.08	17.57
HORVU4Hr1G019600.11	Barley	cytosol	28.26	17.19
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	22.83	12.63
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	10.33	10.95
HORVU4Hr1G006870.1	Barley	plastid	19.02	10.74
HORVU6Hr1G078210.1	Barley	mitochondrion	13.04	8.6
HORVU2Hr1G126540.1	Barley	cytosol	5.16	5.59

Protein Annotations

KEGG:00970+6.3.5.7	MapMan:17.2.8.1	Gene3D:3.90.1300.10	UniProt:A0A287SAU1	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_CS	InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0016787	EnsemblPlantsGene:HORVU5Hr1G093800	EnsemblPlants:HORVU5Hr1G093800.2	InterPro:IPR036928	PFAM:PF01425	ScanProsite:PS00571
PANTHER:PTHR11895	PANTHER:PTHR11895:SF141	SUPFAM:SSF75304	UniParc:UPI000B47A1E1	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:593057233..593059319

Molecular Weight (calculated)

38821.3 Da

IEP (calculated)

8.067

GRAVY (calculated)

0.012

Length

368 amino acids

Sequence
(BLAST)

001: VIGKMLSTLH PPRSLYSRFP RCISSRPVTL CTFTAQSPPS QILSIRHALL SRHVTATQLA ESYLTRLRLT EPHLRSFLHL SDAVSKQASR IDERIAENEQ
101: VGPLAGVLVA VKDNICTADM PSTGGSRVLE GYRPPFDATA VRKIKELGGI VVGKTNLDEF GMGSTTEGSA FQVTANPWDV SRVPGGSSGG SAAAVSARQC
201: VVSLGSDTGG SVRQPASFCG VVGLKPTYGR VSRYGLMAYA SSLDVIGCFG SSVADSGILL HAISGHDRLD ATSSKREVPD FASQFASMDL LESKPLKGLR
301: VGLIRETLDD GVDSGVISAI RGAASHLEDL GCSVSEVSLP SFSLGLPAYY ILAASESSSN LSRYDGVR

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.