CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026512.1-P	Field mustard	cytosol	100.0	100.0
HORVU5Hr1G093800.2	Barley	mitochondrion, plastid	55.8	27.45
CDY04173	Canola	plastid	80.66	27.14
AT3G25660.1	Thale cress	plastid	79.56	26.82
CDY59872	Canola	plastid	79.56	26.77
KRG98874	Soybean	mitochondrion	69.61	26.53
Solyc10g007840.2.1	Tomato	plastid	71.82	24.57
VIT_12s0028g01330.t01	Wine grape	mitochondrion	71.27	23.63
KRH46093	Soybean	mitochondrion	70.17	23.39
TraesCS2D01G521500.1	Wheat	plastid	64.09	21.44
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	64.09	21.44
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	64.09	21.44
EES11532	Sorghum	plastid	63.54	21.26
Os04t0643200-00	Rice	plastid	62.43	21.16
GSMUA_Achr9P09040_001	Banana	plastid	66.3	20.73
Zm00001d002104_P001	Maize	mitochondrion, plastid	62.43	20.7
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	28.18	14.7
CDY06342	Canola	cytosol	19.89	8.53
CDY22653	Canola	cytosol	19.34	8.29
CDY58262	Canola	cytosol	24.86	7.31
CDX84527	Canola	cytosol	24.86	7.31
CDY46805	Canola	cytosol	22.65	6.71
CDY31318	Canola	cytosol	22.65	6.69
CDY21581	Canola	cytosol	22.1	6.63
CDX69906	Canola	cytosol, plastid	22.1	6.63
CDX93679	Canola	mitochondrion	21.55	6.49
CDY40591	Canola	endoplasmic reticulum, golgi	20.99	6.33
CDX75952	Canola	endoplasmic reticulum	19.89	6.1
CDY51926	Canola	endoplasmic reticulum	19.34	5.92
CDY03602	Canola	cytosol, plastid	9.39	5.56
CDX70030	Canola	plastid	18.23	5.1
CDX98979	Canola	plastid	18.23	5.08
CDX95800	Canola	endoplasmic reticulum	18.78	4.44
CDX92180	Canola	endoplasmic reticulum	18.23	4.14
CDX69905	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	GO:A0A078IB15	UniProt:A0A078IB15	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_dom	EnsemblPlants:CDY46509	ProteinID:CDY46509	ProteinID:CDY46509.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004040	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00084114001	InterPro:IPR036928	PFAM:PF01425
PANTHER:PTHR11895	PANTHER:PTHR11895:SF141	MetaCyc:PWY-5921	SUPFAM:SSF75304	UniParc:UPI00025464D5	SEG:seg

Description

BnaA02g27590DBnaA02g27590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB15]

Coordinates

chrLK032671:-:158534..159537

Molecular Weight (calculated)

19377.1 Da

IEP (calculated)

5.572

GRAVY (calculated)

0.155

Length

181 amino acids

Sequence
(BLAST)

001: MDVVGKKNMD EFGMGRTNEA SAFQVTANQW DLTRVLGGSS GSSAAAIEER LCIVSPGLDL WLNASSLDVI GCFVSTVADA DMLLHAISGF ESKSSTHEAA
101: SHFEALGCVL TEVSLPFFSL GVPAFYVLAS SESSSNLSRY DGVRTLIRKD YKAALDHNDI LISPAAPSAA YKILVKRKMI H

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.