Factsheet for GSMUA_Achr9P09040_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	54.4	76.09
Zm00001d002104_P001	Maize	mitochondrion, plastid	70.64	74.91
EES11532	Sorghum	plastid	69.95	74.86
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	68.74	73.57
TraesCS2D01G521500.1	Wheat	plastid	68.39	73.2
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	68.39	73.2
VIT_12s0028g01330.t01	Wine grape	mitochondrion	68.57	72.71
Solyc10g007840.2.1	Tomato	plastid	66.15	72.4
KRG98874	Soybean	mitochondrion	58.55	71.37
AT3G25660.1	Thale cress	plastid	65.63	70.76
CDY04173	Canola	plastid	65.28	70.26
CDY59872	Canola	plastid	64.94	69.89
HORVU2Hr1G115000.1	Barley	cytosol, plastid	67.01	69.66
KRH46093	Soybean	mitochondrion	65.28	69.61
Os04t0643200-00	Rice	plastid	61.83	67.04
CDY46509	Canola	cytosol	20.73	66.3
Bra026512.1-P	Field mustard	cytosol	20.73	66.3
PGSC0003DMT400054702	Potato	mitochondrion	49.05	55.47
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	25.22	42.07
GSMUA_Achr4P18300_001	Banana	cytosol	14.34	20.85
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	15.03	20.81
GSMUA_Achr2P20550_001	Banana	mitochondrion	23.66	19.11
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	17.79	17.4
GSMUA_Achr4P18290_001	Banana	plastid	7.6	16.86
GSMUA_Achr9P14860_001	Banana	mitochondrion	17.27	16.05

Protein Annotations

KEGG:00970+6.3.5.7	MapMan:17.2.8.1	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS
InterPro:Amidase_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016874	GO:GO:0016884	GO:GO:0019538	GO:GO:0030956	GO:GO:0032543	GO:GO:0050567
GO:GO:0070681	EnsemblPlantsGene:GSMUA_Achr9G09040_001	EnsemblPlants:GSMUA_Achr9P09040_001	EnsemblPlants:GSMUA_Achr9T09040_001	InterPro:GatA	InterPro:IPR036928
UniProt:M0TYR3	HAMAP:MF_00120	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF141
SUPFAM:SSF75304	TIGRFAMs:TIGR00132	TMHMM:TMhelix	UniParc:UPI000296FA23	SEG:seg	:

Description

Glutamyl-tRNA(Gln) amidotransferase subunit A [Source:GMGC_GENE;Acc:GSMUA_Achr9G09040_001]

Coordinates

chr9:-:5842092..5848147

Molecular Weight (calculated)

61483.0 Da

IEP (calculated)

5.532

GRAVY (calculated)

0.182

Length

579 amino acids

Sequence
(BLAST)

001: MPCLIQSPRF LLSHCLSPLP PNARAVFCGR LSHRSAAAAL SSDAQTIASN QSSSCAPLPP PPSSEILSVR ESLLSRRRTA AEIAEEYLDR LRRTEPQIRS
101: FLHVSETVMR EAEDLDRLVE SGAELGPLAG VLIGVKDNIC TVDMPSTGGS RILEGYRPAF DATAVRKLKE AGAIVIGKTN LDEFGMGSTT EGSGFQVTAN
201: PWDVSRVPGG SSGGSAAAVS ARQCAVSLGS DTGGSVRQPA SFCGVVGLKP TYGRISRFGL MSYASSLDVI GCFGSSIIDA AIILNAVAGH DRFDATSSMN
301: EVPDYASCLI SIDQFDSKPL KGLRIGMITE TMGDGVDMGV VSSIKAAALH LEELGAVLTE VSLPSFSLGL PAYYILASSE ASSNLSRYDG VRYGNQVAAD
401: ELISLYGDSR AIGFGPEVKM RILMGTYALS AGYYEAYYKR AQQVRTLVRK SFKDALETND ILISPAAPSP AFRIGKFDAS FLCTTVFFFA CLCVIFIFAG
501: EKVNDPLAMY AGDIMTVNVN LAGVPALVVP CGFVEGGIVG LPVGLQMIGT SFSEEKLLRV GHIFEQTLQN HRFVPPLLA

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.