Factsheet for Bra017354.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
nucleus 1
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026512.1-P	Field mustard	cytosol	35.02	80.11
CDY04173	Canola	plastid	100.0	76.95
CDY59872	Canola	plastid	98.31	75.65
AT3G25660.1	Thale cress	plastid	94.93	73.18
KRG98874	Soybean	mitochondrion	77.29	67.37
VIT_12s0028g01330.t01	Wine grape	mitochondrion	82.13	62.27
KRH46093	Soybean	mitochondrion	81.64	62.25
Solyc10g007840.2.1	Tomato	plastid	78.99	61.81
EES11532	Sorghum	plastid	74.15	56.75
Zm00001d002104_P001	Maize	mitochondrion, plastid	74.64	56.59
HORVU5Hr1G093800.2	Barley	mitochondrion, plastid	50.24	56.52
TraesCS2D01G521500.1	Wheat	plastid	73.19	56.01
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	73.19	56.01
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	72.95	55.82
GSMUA_Achr9P09040_001	Banana	plastid	76.09	54.4
Os04t0643200-00	Rice	plastid	65.22	50.56
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	35.99	42.94
Bra031652.1-P	Field mustard	cytosol	20.77	20.43
Bra031917.1-P	Field mustard	cytosol	24.64	16.64
Bra018737.1-P	Field mustard	mitochondrion	20.77	14.31
Bra009269.1-P	Field mustard	plastid	20.29	12.98
Bra001692.1-P	Field mustard	endoplasmic reticulum	18.12	12.69
Bra009383.1-P	Field mustard	cytosol, plastid	20.05	8.99
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	MapMan:17.2.8.1	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS
InterPro:Amidase_dom	EnsemblPlantsGene:Bra017354	EnsemblPlants:Bra017354.1	EnsemblPlants:Bra017354.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016787	GO:GO:0016874	GO:GO:0016884	GO:GO:0019538	GO:GO:0030956	GO:GO:0032543
GO:GO:0050567	GO:GO:0070681	InterPro:GatA	InterPro:IPR036928	UniProt:M4DLH3	HAMAP:MF_00120
PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF141	SUPFAM:SSF75304	TIGRFAMs:TIGR00132
UniParc:UPI00025421D8	SEG:seg	:	:	:	:

Description

AT3G25660 (E=3e-220) | glutamyl-tRNA(Gln) amidotransferase, putative

Coordinates

chrA09:+:14511916..14513813

Molecular Weight (calculated)

43763.3 Da

IEP (calculated)

5.474

GRAVY (calculated)

-0.004

Length

414 amino acids

Sequence
(BLAST)

001: MPSTAASRIL EHYRPPFDAT AVKKIKEMGG IVVGKTNMDE FGMGSTTEAS AFQVTANPWD LTRVPGGSSG GSAAAVAARQ CMVSLGSDTG GSVRQPASFC
101: GVVGLKPTYG RVSRFGLMAY ASSLDVIGCF GSTVADAGML LHAVSGYDRF DSTSSKQDVP EFDTQFLSMD SFESKPLKGV RVGLIRETLE EGVDSGVRSA
201: TQEAASHLEA LGCVVTEVSL PSFSLGLPAY YVIASSESSS NLSRYDGVRY GNQVMADELN KLYECSRGQG FGGEVKMRIL MGTYALSAGY YDAYYKRAQQ
301: VRTLIRKDFK AALDHNDILI SPAAPSAAYK IGEKKDDPLA MYAGDIMTVN VNLAGLPAIV LPCGLVEGGP SGLPVGLQMI GAAFDEEKLL KVGHIFEQTL
401: KGSGFVPPTL PNVA

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.