Factsheet for Bra031652.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06342	Canola	cytosol	100.0	99.76
CDY22653	Canola	cytosol	96.44	96.21
CDY03602	Canola	cytosol, plastid	66.98	92.16
AT1G08980.1	Thale cress	cytosol	86.94	86.12
VIT_14s0128g00320.t01	Wine grape	cytosol	65.56	63.74
KRG92836	Soybean	cytosol	65.08	63.28
KRH33958	Soybean	cytosol	64.85	63.05
PGSC0003DMT400093880	Potato	cytosol	64.13	62.5
Solyc10g086170.1.1	Tomato	cytosol	62.47	61.74
Os04t0118100-01	Rice	cytosol	58.43	56.55
EER97555	Sorghum	cytosol	57.96	55.84
TraesCS2D01G573300.1	Wheat	cytosol	58.91	55.23
Zm00001d006886_P002	Maize	cytosol	57.72	54.73
TraesCS2A01G562400.1	Wheat	cytosol	59.14	54.61
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	54.16	54.55
Os04t0117900-01	Rice	plasma membrane, plastid	56.06	54.38
HORVU6Hr1G060680.1	Barley	cytosol	20.43	54.09
TraesCS2B01G624200.1	Wheat	cytosol	57.72	54.0
TraesCS5D01G083700.1	Wheat	cytosol	37.77	52.82
TraesCS2B01G603900.1	Wheat	cytosol	55.34	52.71
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	51.54	50.12
Bra001692.1-P	Field mustard	endoplasmic reticulum	45.84	32.66
Bra018737.1-P	Field mustard	mitochondrion	45.84	32.11
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	20.43	20.77
Bra009383.1-P	Field mustard	cytosol, plastid	45.37	20.69
Bra026512.1-P	Field mustard	cytosol	8.55	19.89
Bra031917.1-P	Field mustard	cytosol	24.94	17.13
Bra009269.1-P	Field mustard	plastid	17.58	11.44
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	MapMan:11.2.1.2.1	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS
InterPro:Amidase_dom	EnsemblPlantsGene:Bra031652	EnsemblPlants:Bra031652.1	EnsemblPlants:Bra031652.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009684
GO:GO:0009851	GO:GO:0009987	GO:GO:0016787	GO:GO:0016810	GO:GO:0043864	InterPro:IPR036928
UniProt:M4ES74	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	SUPFAM:SSF75304
UniParc:UPI000254329A	SEG:seg	:	:	:	:

Description

AT1G08980 (E=3e-182) ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase

Coordinates

chrA09:-:35379334..35381630

Molecular Weight (calculated)

44767.7 Da

IEP (calculated)

4.979

GRAVY (calculated)

0.181

Length

421 amino acids

Sequence
(BLAST)

001: MAISNDYGAF IEKSTISPTP SSSFPSLKGL TFAIKDIFDV EGRVTGFGNP DWLRTHSAAT STAPVVSSLL EAGATSLGIT IMDEMAYSIN GENAHYGTPV
101: NPVASERVPG GSSSGSAVAV AAGLVDFSIG TDTGGSVRVP ASYCGIFGLR PSHGVVSTVG VTPMAQSFDT VGWFARDTAT LKRVGCVLLQ QHDVDAKEPS
201: QLIIADDCFK LCSVPRELLV LPVVQSVDKS FGGNTVINKV DLGEYIQENV PSLKHFMTSE TQREFCIPSL MALSSSMRML QRYEFKMNHG EWVSSVKPEF
301: GPGISERIEE AIRVSDEKID LCRLVKTELL TALSTLLGEN GVLVIPTVPG PPPHLQADVV ALESFRSRAF SLLSIAGVSG LCQVSIPLGL HENLPISVSL
401: VANHGSDGFL LSLVDSLSKF M

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.