Factsheet for HORVU6Hr1G060680.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0128g00320.t01	Wine grape	cytosol	56.6	20.79
Bra031652.1-P	Field mustard	cytosol	54.09	20.43
CDY06342	Canola	cytosol	54.09	20.38
CDY22653	Canola	cytosol	53.46	20.14
AT1G08980.1	Thale cress	cytosol	52.83	19.76
Solyc10g086170.1.1	Tomato	cytosol	51.57	19.25
KRG92836	Soybean	cytosol	52.2	19.17
KRH33958	Soybean	cytosol	52.2	19.17
PGSC0003DMT400093880	Potato	cytosol	51.57	18.98
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	49.69	18.9
CDY03602	Canola	cytosol, plastid	26.42	13.73
HORVU5Hr1G093800.2	Barley	mitochondrion, plastid	22.64	9.78
HORVU4Hr1G006870.1	Barley	plastid	35.22	8.59
HORVU6Hr1G078210.1	Barley	mitochondrion	26.42	7.53
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	28.3	7.39
HORVU4Hr1G019600.11	Barley	cytosol	27.04	7.11
HORVU2Hr1G115000.1	Barley	cytosol, plastid	23.9	6.82
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	20.13	4.81
HORVU2Hr1G126540.1	Barley	cytosol	10.06	4.71

Protein Annotations

EnsemblPlants:HORVU6Hr1G060680.1	EnsemblPlantsGene:HORVU6Hr1G060680	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928	KEGG:00970+6.3.5.7
PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304	UniParc:UPI000B47EE66
UniProt:A0A287UCW2	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:404322088..404324534

Molecular Weight (calculated)

17208.6 Da

IEP (calculated)

4.693

GRAVY (calculated)

0.277

Length

159 amino acids

Sequence
(BLAST)

001: MLPPSSDHQH QLPLQGLAFA IKEIRFGSAA AFATAATGVG TTVMDEMTYN MNRENAHYAL PLTPMLPVAS PSASAVTVAA SLADFALDTD TGDSFSVPPA
101: YCVIFYLRPS HGPVSTESVL PMAQMFDTVG NFSLAVLLRV FTRQYYSSFQ VFIQLYESL

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.