Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06342 | Canola | cytosol | 96.45 | 96.45 |
| Bra031652.1-P | Field mustard | cytosol | 96.21 | 96.44 |
| CDY03602 | Canola | cytosol, plastid | 69.91 | 96.41 |
| AT1G08980.1 | Thale cress | cytosol | 85.78 | 85.18 |
| VIT_14s0128g00320.t01 | Wine grape | cytosol | 65.4 | 63.74 |
| KRH33958 | Soybean | cytosol | 64.45 | 62.82 |
| KRG92836 | Soybean | cytosol | 64.22 | 62.59 |
| PGSC0003DMT400093880 | Potato | cytosol | 63.51 | 62.04 |
| Solyc10g086170.1.1 | Tomato | cytosol | 62.09 | 61.5 |
| Os04t0118100-01 | Rice | cytosol | 57.82 | 56.09 |
| EER97555 | Sorghum | cytosol | 57.58 | 55.61 |
| TraesCS2D01G573300.1 | Wheat | cytosol | 59.0 | 55.46 |
| TraesCS2A01G562400.1 | Wheat | cytosol | 59.24 | 54.82 |
| GSMUA_Achr3P09030_001 | Banana | cytosol, plasma membrane | 54.03 | 54.55 |
| Zm00001d006886_P002 | Maize | cytosol | 56.87 | 54.05 |
| TraesCS2B01G624200.1 | Wheat | cytosol | 57.58 | 54.0 |
| HORVU6Hr1G060680.1 | Barley | cytosol | 20.14 | 53.46 |
| Os04t0117900-01 | Rice | plasma membrane, plastid | 54.98 | 53.46 |
| TraesCS5D01G083700.1 | Wheat | cytosol | 37.68 | 52.82 |
| TraesCS2B01G603900.1 | Wheat | cytosol | 55.21 | 52.71 |
| TraesCS2D01G573400.3 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 51.18 | 49.88 |
| CDX75952 | Canola | endoplasmic reticulum | 46.68 | 33.39 |
| CDY51926 | Canola | endoplasmic reticulum | 46.68 | 33.33 |
| CDX93679 | Canola | mitochondrion | 46.21 | 32.45 |
| CDY40591 | Canola | endoplasmic reticulum, golgi | 45.5 | 32.0 |
| CDY21581 | Canola | cytosol | 44.31 | 31.01 |
| CDX69906 | Canola | cytosol, plastid | 44.08 | 30.85 |
| CDX95800 | Canola | endoplasmic reticulum | 46.21 | 25.49 |
| CDX92180 | Canola | endoplasmic reticulum | 47.63 | 25.19 |
| CDY46509 | Canola | cytosol | 8.29 | 19.34 |
| CDY04173 | Canola | plastid | 21.8 | 17.1 |
| CDY59872 | Canola | plastid | 21.8 | 17.1 |
| CDY31318 | Canola | cytosol | 24.64 | 16.97 |
| CDY46805 | Canola | cytosol | 24.41 | 16.86 |
| CDY58262 | Canola | cytosol | 24.41 | 16.72 |
| CDX84527 | Canola | cytosol | 24.17 | 16.56 |
| CDX98979 | Canola | plastid | 17.77 | 11.56 |
| CDX70030 | Canola | plastid | 17.54 | 11.44 |
| CDX69905 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00970+6.3.5.7 | MapMan:11.2.1.2.1 | Gene3D:3.90.1300.10 | GO:A0A078GDD8 | UniProt:A0A078GDD8 | InterPro:AS_sf |
| InterPro:Amidase | InterPro:Amidase_dom | EnsemblPlants:CDY22653 | ProteinID:CDY22653 | ProteinID:CDY22653.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004040 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00019323001 | InterPro:IPR036928 | PFAM:PF01425 |
| PANTHER:PTHR11895 | PANTHER:PTHR11895:SF111 | MetaCyc:PWY-5921 | SUPFAM:SSF75304 | UniParc:UPI0004EDFA3A | SEG:seg |
Description
BnaC08g42870DBnaC08g42870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDD8]
Coordinates
chrLK032134:-:306958..310028
Molecular Weight (calculated)
44884.9 Da
IEP (calculated)
4.887
GRAVY (calculated)
0.220
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISNDYGAF IEKSTISPRP SSSFPSLKDL TFAIKDIFDV EGRVTGFGNP DWLRTHSAAT STAPVVSSLL EAGATSLGIT IMDEMAYSIN GENAHYGTPV
101: NPVASERVPG GSSSGSAVAV AAGLVDFSIA GTDTGGSVRV PASYCGIFGL RPSHGVVSTV GVTPMAQSFD TVGWFARDTA TLKRVGCVLL QQPHLDATEP
201: SQLIIADDCF KLCSVPRELL VLPLVQSVDK SFGGNTVINK VDLGAYIEEH VPSLKHFMTS ETQREFCIPS LMALSSSMRM LQRFEFKMNH GEWVSLVKPE
301: FGPGISERIE EAIRVSDEKI DLCRLVKTEL LTALSTLLGD NGVLVIPTVP GPPPHLQADV VALESFRSRA FSLLSIAGVS GLCQVSIPLG LHENLPISVS
401: LVATHGSDGF LLSLVDSLSE FM
101: NPVASERVPG GSSSGSAVAV AAGLVDFSIA GTDTGGSVRV PASYCGIFGL RPSHGVVSTV GVTPMAQSFD TVGWFARDTA TLKRVGCVLL QQPHLDATEP
201: SQLIIADDCF KLCSVPRELL VLPLVQSVDK SFGGNTVINK VDLGAYIEEH VPSLKHFMTS ETQREFCIPS LMALSSSMRM LQRFEFKMNH GEWVSLVKPE
301: FGPGISERIE EAIRVSDEKI DLCRLVKTEL LTALSTLLGD NGVLVIPTVP GPPPHLQADV VALESFRSRA FSLLSIAGVS GLCQVSIPLG LHENLPISVS
401: LVATHGSDGF LLSLVDSLSE FM
001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI
Arabidopsis Description
AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.