Factsheet for TraesCS2D01G573400.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G624200.1	Wheat	cytosol	81.76	78.67
TraesCS2D01G573300.1	Wheat	cytosol	81.29	78.4
TraesCS2A01G562400.1	Wheat	cytosol	81.06	76.97
EER97555	Sorghum	cytosol	66.51	65.9
Os04t0118100-01	Rice	cytosol	65.82	65.52
TraesCS5D01G083700.1	Wheat	cytosol	45.27	65.12
Zm00001d006886_P002	Maize	cytosol	66.51	64.86
Os04t0117900-01	Rice	plasma membrane, plastid	63.05	62.9
HORVU2Hr1G126540.1	Barley	cytosol	48.27	61.47
VIT_14s0128g00320.t01	Wine grape	cytosol	53.81	53.81
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	51.04	52.87
KRG92836	Soybean	cytosol	51.96	51.96
Bra031652.1-P	Field mustard	cytosol	50.12	51.54
CDY06342	Canola	cytosol	50.12	51.42
CDY22653	Canola	cytosol	49.88	51.18
KRH33958	Soybean	cytosol	50.58	50.58
Solyc10g086170.1.1	Tomato	cytosol	48.73	49.53
AT1G08980.1	Thale cress	cytosol	48.5	49.41
CDY03602	Canola	cytosol, plastid	30.25	42.81
TraesCS6D01G298000.1	Wheat	plastid	40.18	28.57
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	37.88	27.89
TraesCS2D01G521500.1	Wheat	plastid	21.25	17.01
TraesCS4D01G108100.1	Wheat	cytosol	21.02	15.04
TraesCS1D01G421100.1	Wheat	golgi	20.79	14.75
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	20.79	14.35
TraesCS2D01G039900.1	Wheat	mitochondrion	19.86	14.17
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	19.86	13.96
TraesCS2D01G040000.1	Wheat	cytosol	19.17	13.93
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	18.01	12.17
PGSC0003DMT400031298	Potato	cytosol	0.69	1.88

Protein Annotations

EnsemblPlants:TraesCS2D01G573400.3	EnsemblPlantsGene:TraesCS2D01G573400	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928	KEGG:00970+6.3.5.7
PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304	MapMan:35.1

Description

No Description!

Coordinates

chr2D:-:638505107..638507100

Molecular Weight (calculated)

45563.1 Da

IEP (calculated)

5.387

GRAVY (calculated)

0.054

Length

433 amino acids

Sequence
(BLAST)

001: MEDSGDDHGA FMEKFILLPP PSSDQQQLPL HGLTFAIKDI FDVAGRVTGF GTPDWARTHA PAAATAPAVL AALGAGATGV GKTVMDEMAY SINGENAHYG
101: TPANPCVPGG SSSGSAVAVA ASLADFALGT NTGGSVRVPA AYCGIFGLRP SHGQVSAENV VPHGSDVRHR WFARDVPTLS RVTDVMLPPR YDDDRAVSSF
201: LQTVSRSWAL STTTPTRSST LQRPKYSAVM QWWTMETLGD SVSSNVPCIG EFMTDLSAIE ASSSCVPALS AISRVMQVLQ RSEFKANHAE WVNTVKPNLG
301: PGIRERVQEA IASEDESAME DLHAVRTEFK SALAVLLKDD GILAIPTVPG APPKLRMDAA LLEDFRAKAF SLLSIAGLLG FCQVSIPLGT RDGVSVSVSL
401: LAGHGGDRFL VAVAQELYDA LKAQAAAAWG LSA

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.