Factsheet for TraesCS2D01G039600.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:

mitochondrion 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G041300.1	Wheat	golgi	96.97	98.7
TraesCS2B01G053700.1	Wheat	mitochondrion, nucleus, peroxisome	95.22	96.92
TraesCS2D01G040000.1	Wheat	cytosol	82.62	86.91
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	84.21	85.71
TraesCS2D01G039900.1	Wheat	mitochondrion	79.74	82.37
EES11732	Sorghum	cytosol, nucleus, plastid	80.06	81.23
Zm00001d024936_P002	Maize	mitochondrion	76.4	69.22
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	62.04	64.09
GSMUA_Achr4P18300_001	Banana	cytosol	39.71	62.56
KRH10653	Soybean	cytosol	59.65	61.61
Solyc01g106350.2.1	Tomato	cytosol	58.69	61.33
KRH21697	Soybean	cytosol	58.85	60.79
PGSC0003DMT400008086	Potato	cytosol, peroxisome, plastid	58.69	60.53
Solyc01g106360.2.1	Tomato	plastid	58.53	60.36
AT5G64440.1	Thale cress	cytosol, nucleus, peroxisome	56.3	58.15
CDY46805	Canola	cytosol	56.46	57.94
CDY58262	Canola	cytosol	56.46	57.47
CDX84527	Canola	cytosol	56.3	57.31
Bra031917.1-P	Field mustard	cytosol	55.98	57.26
CDY31318	Canola	cytosol	55.82	57.1
TraesCS1D01G421100.1	Wheat	golgi	40.83	41.97
TraesCS4D01G108100.1	Wheat	cytosol	38.6	40.0
TraesCS2D01G521500.1	Wheat	plastid	23.29	26.99
TraesCS5D01G083700.1	Wheat	cytosol	10.37	21.59
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	14.35	20.79
TraesCS2D01G573300.1	Wheat	cytosol	14.83	20.71
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	16.43	17.52
TraesCS6D01G298000.1	Wheat	plastid	16.27	16.75
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	16.27	15.91

Protein Annotations

EnsemblPlants:TraesCS2D01G039600.2	EnsemblPlantsGene:TraesCS2D01G039600	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF44	PFAM:PF01425	ScanProsite:PS00571	SEG:seg
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:14412370..14420797

Molecular Weight (calculated)

68224.2 Da

IEP (calculated)

6.669

GRAVY (calculated)

-0.078

Length

627 amino acids

Sequence
(BLAST)

001: MGGGSGGRGK GMPRAMAPVE EVDVAAVRYK PAELQAPHLT GFPLRAFVWL LESPLLGPLV TSILKKQNNM TQMLQHTVIP ERPMFYPEYP PQEPERGVVT
101: LGDDRDPVDR VEEALSCLAP YDPSGRFTSA DEKNPFLYWK IRDFAYAYRS GITTPSAVAE LVIAGVEEWN NKKPPMPMLI FFKADDLRKQ ADASTKRFEK
201: GSPISVLDGI FFAVKDDIDC LPYPSKSATT FFDEIRPVEK DAVAVSRLRK CGVIFIGKAN MHELGLGVTG NNPNYGTVRN PHSVDRYTGG SSSGPAALVS
301: SGLCSGAIGT DGGGSVRIPS SLCGIVGLKT TFGRTDMTGV VCDAGTVEVA SPLTSSVEDS VLLYSALAGS RPMDKLTLRP LLHLFPFSSV QSLLCVPNLV
401: SSENSKILQS VKVGKYTEWF HDVPDNEVSN TCEDALNLLC STFGCQIEEI ILPELEEMRT AHLVSIGSEA FSDMNAHYQA GRRTEMTLDT RASLALFKSF
501: TSADYVAAQC LRRRIMYYHM EAFKKVDVIA TPTTGMTAPK IPPSALKGES DYVVSAKLMQ FIFAGNLLGL PAISVPVGHD KQGLPIGLQL IGRPWGEASL
601: LRVASAVEEL CLKRRSRPST FYDILKT

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.