Factsheet for Solyc01g106360.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008086	Potato	cytosol, peroxisome, plastid	96.38	96.38
Solyc01g106350.2.1	Tomato	cytosol	87.17	88.33
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	74.01	74.14
Solyc01g106340.2.1	Tomato	cytosol, golgi, plasma membrane	73.68	73.44
KRH10653	Soybean	cytosol	72.04	72.16
KRH21697	Soybean	cytosol	71.22	71.33
Solyc01g106330.2.1	Tomato	cytosol	70.23	69.09
GSMUA_Achr4P18300_001	Banana	cytosol	43.42	66.33
EES11732	Sorghum	cytosol, nucleus, plastid	61.02	60.03
TraesCS2B01G053800.1	Wheat	cytosol	59.87	59.77
TraesCS2B01G053700.1	Wheat	mitochondrion, nucleus, peroxisome	60.53	59.74
TraesCS2D01G040000.1	Wheat	cytosol	58.55	59.73
TraesCS2A01G041300.1	Wheat	golgi	60.36	59.58
TraesCS2A01G041400.1	Wheat	plastid	59.05	59.05
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	60.36	58.53
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	58.72	57.95
TraesCS2D01G039900.1	Wheat	mitochondrion	53.45	53.54
Zm00001d024936_P002	Maize	mitochondrion	59.05	51.88
Solyc12g070090.1.1	Tomato	cytosol	12.5	35.19
Solyc12g070080.1.1	Tomato	cytosol, plastid	8.55	34.9
Solyc10g007840.2.1	Tomato	plastid	21.38	24.57
Solyc10g086170.1.1	Tomato	cytosol	14.8	21.13
Solyc06g068690.2.1	Tomato	extracellular	18.26	19.07
Solyc03g118030.2.1	Tomato	plastid	19.08	18.59
Solyc10g047300.1.1	Tomato	plastid	17.27	17.56
Solyc03g118690.2.1	Tomato	plastid	16.12	16.61

Protein Annotations

EnsemblPlants:Solyc01g106360.2.1	EnsemblPlantsGene:Solyc01g106360.2	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF44	PFAM:PF01425	ScanProsite:PS00571	SEG:seg
SUPFAM:SSF75304	UniParc:UPI00027676EF	UniProt:K4B2K4	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1:+:94290499..94298378

Molecular Weight (calculated)

66718.1 Da

IEP (calculated)

5.912

GRAVY (calculated)

-0.136

Length

608 amino acids

Sequence
(BLAST)

001: MGNKRVMLPA SEIDLTAVKY IPENIQAPHL TGFWFKFFLN LAEVPGIGSL IVNRLKNDNK FDEKLKYTVI PEYPMFKPEF PPQEPEPAVV SIEEDAKPED
101: RVELALKCLP EYDPASNWSG DTTTSFRYWK IRDYAYAYRS KFTTPSMVAE RFISAIEEFN NKNPTTPLLI SFDPDDVRKQ AAASTQRFEQ GNPLSILDGI
201: FMAIKDDIDC YSHPSKGATT WMHEVREVKK DAVSVSRLRS CGAILVGKAN MHELGLGTTG NNANYGTTRN PHDPDRYTGG SSSGPAAIVA LGLCSAALGT
301: DGGGSVRIPS SLCGVVGLKS TYGRTDMTGS LCGDGTVAII GPIATTVEDT ILVYAAILGS SPADRISLRP SLPCVPNFSS QESLQSVESL RLGKYTEWFN
401: DVFSIDISDK CGNVLSQLSE EHGCRIVEIV IPELHEMRIA HVVSIGSEAL CALNPDCCDG KGERLTYDTR TNLTLFRSFT AADYVASQRL RRRLMYFHME
501: IFKRVDIIVT PTTGMTAPII PPSALKVGET NMQVTGNLMR FIITANLLGL PAVTVPVGYD KQGLPIGIQL IGRPWCEASI LRLAAAIEET CAEPKKKPLQ
601: YYDILKGN

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.