Factsheet for TraesCS2D01G040000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G053800.1	Wheat	cytosol	95.97	93.92
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	95.47	92.37
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	86.91	82.62
EES11732	Sorghum	cytosol, nucleus, plastid	79.03	76.21
TraesCS2D01G039900.1	Wheat	mitochondrion	73.66	72.32
Zm00001d024936_P002	Maize	mitochondrion	75.5	65.03
GSMUA_Achr4P18300_001	Banana	cytosol	41.28	61.81
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	62.58	61.45
KRH10653	Soybean	cytosol	60.91	59.8
KRH21697	Soybean	cytosol	60.23	59.14
Solyc01g106350.2.1	Tomato	cytosol	59.23	58.83
Solyc01g106360.2.1	Tomato	plastid	59.73	58.55
PGSC0003DMT400008086	Potato	cytosol, peroxisome, plastid	59.06	57.89
CDY46805	Canola	cytosol	57.05	55.65
CDY58262	Canola	cytosol	57.05	55.19
CDX84527	Canola	cytosol	57.05	55.19
AT5G64440.1	Thale cress	cytosol, nucleus, peroxisome	56.21	55.19
Bra031917.1-P	Field mustard	cytosol	56.38	54.81
CDY31318	Canola	cytosol	56.04	54.49
TraesCS1D01G421100.1	Wheat	golgi	42.28	41.31
TraesCS4D01G108100.1	Wheat	cytosol	40.44	39.83
TraesCS2D01G521500.1	Wheat	plastid	22.32	24.58
TraesCS5D01G083700.1	Wheat	cytosol	10.74	21.26
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	13.93	19.17
TraesCS2D01G573300.1	Wheat	cytosol	14.43	19.15
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	17.45	16.22
TraesCS6D01G298000.1	Wheat	plastid	16.44	16.09
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	15.77	15.99

Protein Annotations

EnsemblPlants:TraesCS2D01G040000.1	EnsemblPlantsGene:TraesCS2D01G040000	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF44	PFAM:PF01425	ScanProsite:PS00571	SEG:seg
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:14628357..14640437

Molecular Weight (calculated)

65295.7 Da

IEP (calculated)

6.359

GRAVY (calculated)

-0.058

Length

596 amino acids

Sequence
(BLAST)

001: MGGKVKAMAP VEEVDVSAAR YEPLVVRAPR LTGFSLRAFV WLLESPLLGP LVTSILKKQN NMTQMLQHTV IPDRPMFFPE YPPQEPEQGV VTLGEDRDPV
101: ERVEEALQCF APYDPSGRFA SADEKNPFLY WKIRDFAHAY RSRITTPSAV AEHVIAGVEE WNNKKPPMPM LIYFDADDLR KQADASTKRF EQGSQISVLD
201: GIFFAIKDDI DCFPYPSKSA TTFFDKIRPV EKDAVLVARL RKCGVIFIGK ANMHELGIGV TGNNPNYGTV RNPHSIDRYT GASSSGPAAL VSSGLCSAAI
301: GTDAGGSVRI PSSLCGIVGL KTTFGRTDMT GVLCGCGTAE VASPLTASVE DSMLVYSALA GCRPMDKLTL RPLPPCVPNL VSSENNDILQ SVKVGKYTEW
401: FHDVSDIEIS NTCEDALSLL RNTFGCQIEE IILPELLEMR TAHLVTIGSE GFCQLNAHYQ EGLALIGSFT SADYVASQRL RRRMMYYHME AFRKVDVIAT
501: PTTGITASRI PPSALKGESD YIVSAKLMQF IVAGNLLGFP AITVPVGHDQ QGLPIGLQLI GRPWGEASLL RVASAVEELC LKRRNRPSTF YDILKT

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.