Factsheet for TraesCS2D01G039900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	82.37	79.74
TraesCS2D01G040000.1	Wheat	cytosol	72.32	73.66
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	74.3	73.21
EES11732	Sorghum	cytosol, nucleus, plastid	70.18	68.93
Zm00001d024936_P002	Maize	mitochondrion	67.38	59.1
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	56.51	56.51
KRH10653	Soybean	cytosol	54.53	54.53
KRH21697	Soybean	cytosol	53.71	53.71
Solyc01g106360.2.1	Tomato	plastid	53.54	53.45
Solyc01g106350.2.1	Tomato	cytosol	52.72	53.33
PGSC0003DMT400008086	Potato	cytosol, peroxisome, plastid	53.21	53.12
AT5G64440.1	Thale cress	cytosol, nucleus, peroxisome	51.89	51.89
CDY46805	Canola	cytosol	51.4	51.06
GSMUA_Achr4P18300_001	Banana	cytosol	33.44	51.01
CDX84527	Canola	cytosol	51.57	50.81
CDY31318	Canola	cytosol	51.07	50.57
CDY58262	Canola	cytosol	51.24	50.49
Bra031917.1-P	Field mustard	cytosol	50.91	50.41
TraesCS1D01G421100.1	Wheat	golgi	37.89	37.7
TraesCS4D01G108100.1	Wheat	cytosol	34.76	34.88
TraesCS2D01G521500.1	Wheat	plastid	22.24	24.95
TraesCS5D01G083700.1	Wheat	cytosol	10.21	20.6
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	14.17	19.86
TraesCS2D01G573300.1	Wheat	cytosol	14.5	19.6
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	15.16	15.65
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	16.47	15.6
TraesCS6D01G298000.1	Wheat	plastid	14.83	14.78

Protein Annotations

EnsemblPlants:TraesCS2D01G039900.1	EnsemblPlantsGene:TraesCS2D01G039900	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF44	PFAM:PF01425	ScanProsite:PS00571	SEG:seg
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:14617172..14626753

Molecular Weight (calculated)

66880.3 Da

IEP (calculated)

8.647

GRAVY (calculated)

-0.055

Length

607 amino acids

Sequence
(BLAST)

001: MTKSNSLPMH RHVIKVQFMH TNKHMHIIFI KIIMCNIRTQ PINIVLNKRK LLRYSVVGRI QKDNRTIMRG IKLKPNNSII RYQVLFIPIC HNPLIHGPVD
101: RVEEALSCLA PYDPSGRFTS ADEKNPFLYW KIRDFAYAYR FGITTPLAVA ELIIAGVEEW NNKKPPMPML IHFNANDLRK QADASTKRFE QGSPISVLDG
201: IFSAVKDDID CLPYPSKSAT TFFDEIRPVE KDVVCVSRLQ KCGVIFIGKA NMHELGLGVT GNDTNYGTVR NPHSIDRYTG GSSSGPAALV SSGLCSGAIG
301: TDGGGSVRIP SSLCGIVGLK TTFGRTDMTG VVCDAGTVEV ASPLTSSVED SVLLYSALAG SRPMDKLTLR PSPLCVPNLV SSENSKILQS VKVGKYTEWF
401: HDVPDNEVSN TCEDALNLLC STFGCQIEEI ILPELEEMRT AHLVSIGSEA FSDMNAHYQA GKRTEMTLDT RASLALFKSF TSADYVASQC LRRRIMYYHM
501: EAFKKVDVIA TPTTGMTAPK IPPSALKGES DYVVSAKLMQ FIFAGNLLGL PAISVPVGHD KQGLPIGLQL IGRPWGEASL LRVALAVEEL CLKRRNRPST
601: FYDILKT

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.