Factsheet for PGSC0003DMT400008086

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g106360.2.1	Tomato	plastid	96.38	96.38
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	75.0	75.12
PGSC0003DMT400008084	Potato	cytosol	40.79	74.92
KRH10653	Soybean	cytosol	72.86	72.98
PGSC0003DMT400008093	Potato	cytosol	73.68	72.49
KRH21697	Soybean	cytosol	71.88	71.99
PGSC0003DMT400008091	Potato	cytosol, plasma membrane, plastid	31.74	70.18
GSMUA_Achr4P18300_001	Banana	cytosol	43.91	67.09
EES11732	Sorghum	cytosol, nucleus, plastid	60.86	59.87
TraesCS2A01G041300.1	Wheat	golgi	60.53	59.74
TraesCS2B01G053700.1	Wheat	mitochondrion, nucleus, peroxisome	60.36	59.58
TraesCS2B01G053800.1	Wheat	cytosol	59.38	59.28
TraesCS2D01G040000.1	Wheat	cytosol	57.89	59.06
TraesCS2A01G041400.1	Wheat	plastid	58.72	58.72
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	60.53	58.69
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	58.39	57.63
TraesCS2D01G039900.1	Wheat	mitochondrion	53.12	53.21
Zm00001d024936_P002	Maize	mitochondrion	59.05	51.88
PGSC0003DMT400021967	Potato	cytosol	6.41	37.5
PGSC0003DMT400031298	Potato	cytosol	8.88	33.75
PGSC0003DMT400042984	Potato	extracellular, plasma membrane	14.31	26.13
PGSC0003DMT400054702	Potato	mitochondrion	18.59	22.07
PGSC0003DMT400093880	Potato	cytosol	15.13	21.3
PGSC0003DMT400036918	Potato	plastid	19.9	19.39
PGSC0003DMT400014757	Potato	endoplasmic reticulum	16.12	16.61
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	7.57	13.26

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:102602671	Gene3D:3.90.1300.10	MapMan:35.1	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_CS	InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0016787
InterPro:IPR036928	UniProt:M0ZU14	PFAM:PF01425	EnsemblPlantsGene:PGSC0003DMG402003118	PGSC:PGSC0003DMG402003118	EnsemblPlants:PGSC0003DMT400008086
ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF44	SUPFAM:SSF75304	UniParc:UPI0002952BC1	RefSeq:XP_006361986.1
RefSeq:XP_006361987.1	SEG:seg	:	:	:	:

Description

Glutamyl-tRNA(Gln) amidotransferase subunit A [Source:PGSC_GENE;Acc:PGSC0003DMG402003118]

Coordinates

chr1:+:83000843..83009875

Molecular Weight (calculated)

66553.8 Da

IEP (calculated)

5.879

GRAVY (calculated)

-0.132

Length

608 amino acids

Sequence
(BLAST)

001: MGIKRVMLPA SEVDLTAVKY IPENIQAPHL TGFWFKFFLN LAEVPGIGSL IMNHLKNDNK FDEKLKYTVI PECPMFKPEF PPQEPEPAVV SIEEDAKPED
101: RVELALKCLP EYDPASNWSG DTTASFRYWK IRDYAYAYRS KFTTPSMVAE RFISAIEEFN NKNPTAPLLI SFDPDEVRKQ AAASTQRFEQ GNPLSILDGI
201: FMAIKDDIDC YSHPSKGATA WMHEVREVKK DAVSVSRLRS CGAILVGKAN MHELGLGTTG NNANYGTTRN PHDPDRYTGG SSSGPAAIVA SGLCSAALGT
301: DGGGSVRIPS SLCGVVGLKS TYGRTDMTGS LCDDGTVAII GPIATTVEDT ILVYAAILGS SPADRISLRP SLPCVPNFSS QESLQSVESL RLGKYTEWFN
401: DVFSTDISDK CGNVLSRLSE KHGCETVEIV IPELHEMRLA HVVSIGSEAL CALNPDCYDG KGERLTYDTR TNLALFRSFT AADYVAAQRL RRRLMYFHME
501: IFKRVDIIVT PTTGMTAPII PPGALKVGET NLQVTGNLMR FIITANLLGL PAVTVPVGYD KQGLPIGIQL IGRPWCEASI LRLAAAIEET CAEPKKKPLQ
601: YYDILKGN

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.