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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g106330.2.1 Tomato cytosol 92.07 92.07
PGSC0003DMT400008086 Potato cytosol, peroxisome, plastid 72.49 73.68
PGSC0003DMT400008084 Potato cytosol 36.08 67.37
PGSC0003DMT400008091 Potato cytosol, plasma membrane, plastid 29.77 66.91
AT5G64440.1 Thale cress cytosol, nucleus, peroxisome 64.08 65.24
CDY58262 Canola cytosol 64.08 64.29
CDY46805 Canola cytosol 63.27 63.99
CDX84527 Canola cytosol 63.43 63.64
CDY31318 Canola cytosol 63.11 63.62
Bra031917.1-P Field mustard cytosol 62.78 63.3
PGSC0003DMT400021967 Potato cytosol 6.63 39.42
PGSC0003DMT400031298 Potato cytosol 8.58 33.12
PGSC0003DMT400042984 Potato extracellular, plasma membrane 13.75 25.53
PGSC0003DMT400054702 Potato mitochondrion 18.61 22.46
PGSC0003DMT400093880 Potato cytosol 15.37 21.99
PGSC0003DMT400036918 Potato plastid 19.74 19.55
PGSC0003DMT400014757 Potato endoplasmic reticulum 15.7 16.44
PGSC0003DMT400054703 Potato cytoskeleton, cytosol, nucleus, plastid 7.12 12.68
Protein Annotations
KEGG:00970+6.3.5.7EntrezGene:102604577Gene3D:3.90.1300.10MapMan:35.1InterPro:AS_sfInterPro:Amidase
InterPro:Amidase_CSInterPro:Amidase_domGO:GO:0003674GO:GO:0003824GO:GO:0004040GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005774GO:GO:0005783
GO:GO:0005794GO:GO:0005886GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009605
GO:GO:0009607GO:GO:0009987GO:GO:0016020GO:GO:0016787GO:GO:0042742GO:GO:0047412
GO:GO:0070291InterPro:IPR036928UniProt:M0ZU19PFAM:PF01425EnsemblPlantsGene:PGSC0003DMG400003120PGSC:PGSC0003DMG400003120
EnsemblPlants:PGSC0003DMT400008093ScanProsite:PS00571PANTHER:PTHR11895PANTHER:PTHR11895:SF44SUPFAM:SSF75304UniParc:UPI000294B0C5
RefSeq:XP_006361993.1RefSeq:XP_015158270.1SEG:seg:::
Description
Glutamyl-tRNA(Gln) amidotransferase subunit A [Source:PGSC_GENE;Acc:PGSC0003DMG400003120]
Coordinates
chr1:+:82967110..82975823
Molecular Weight (calculated)
67382.9 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.104
Length
618 amino acids
Sequence
(BLAST)
001: MGKKQIMLPA NEVDLTAVKY VPEKIEAPHL TGLWFKLFVK VMEAPVIGSL IASHLKEKNG ITEILKNTVI PEVPMFIPQF PLQEPEPGVV CLEEDGKPEE
101: RVALALKCLP HYDPTCRWSS DSGEPFQFRY WKIRDYGYAY RSKLTTPSMV AEHFISAMEV FNSKQQSAPL LISFDPEEVR RQAAASTQRF EEGNPLSILD
201: GIFTAVKDDI DCYPHPSKGG SKWFHEVRQV KADGVSVSRL RNSGAILVGK TNMHEFGMGT TGNNPNYGTP GNPHNPKRYT GGSSSGSAAI VASGLCSAAL
301: GTDGGGSVRI PASLCGVVGL KTTFGRTDLT GSLWEAGTVT IIGPITATVE DAILVYAAIS GSSPADRIRL NPSIPCLPDL SSSEGSNILG SLTLGKYTKW
401: FNDVSSTDIS DKCEDVLNQL FRLYGCKTTE IVIPELRELR TAHTVTFGSE SLCLLNPDCE AGKGVRLTND TRTNLALFRS FAASDYISAQ CLRRRIMYYH
501: MEIFKKVDVI VTPTTGMTAP EIPESALAVG ETNLQVVASL MQFAMTANVL GLPAISVPIG HDKQGLPIGL QLIGRPWCEA SILRLAAAIE EISAEYRKKP
601: VEFYDIFKGK SNFNSFHD
Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)
001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN
Arabidopsis Description
FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.