Factsheet for PGSC0003DMT400093880

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g086170.1.1	Tomato	cytosol	90.97	92.25
VIT_14s0128g00320.t01	Wine grape	cytosol	65.28	65.13
Bra031652.1-P	Field mustard	cytosol	62.5	64.13
CDY06342	Canola	cytosol	62.5	63.98
CDY22653	Canola	cytosol	62.04	63.51
KRG92836	Soybean	cytosol	62.5	62.36
KRH33958	Soybean	cytosol	62.04	61.89
AT1G08980.1	Thale cress	cytosol	60.42	61.41
CDY03602	Canola	cytosol, plastid	42.82	60.46
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	53.7	55.5
PGSC0003DMT400021967	Potato	cytosol	13.19	54.81
HORVU6Hr1G060680.1	Barley	cytosol	18.98	51.57
PGSC0003DMT400042984	Potato	extracellular, plasma membrane	32.64	42.34
PGSC0003DMT400014757	Potato	endoplasmic reticulum	44.91	32.88
PGSC0003DMT400054702	Potato	mitochondrion	21.06	17.77
PGSC0003DMT400008084	Potato	cytosol	13.43	17.52
PGSC0003DMT400008093	Potato	cytosol	21.99	15.37
PGSC0003DMT400008086	Potato	cytosol, peroxisome, plastid	21.3	15.13
PGSC0003DMT400036918	Potato	plastid	17.36	12.02
PGSC0003DMT400008091	Potato	cytosol, plasma membrane, plastid	6.48	10.18
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	7.87	9.8
PGSC0003DMT400031298	Potato	cytosol	0.23	0.62

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:102584904	MapMan:11.2.1.2.1	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_CS	InterPro:Amidase_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009684	GO:GO:0009851
GO:GO:0009987	GO:GO:0016787	GO:GO:0016810	GO:GO:0043864	InterPro:IPR036928	UniProt:M1DSX3
PFAM:PF01425	EnsemblPlantsGene:PGSC0003DMG400043451	PGSC:PGSC0003DMG400043451	EnsemblPlants:PGSC0003DMT400093880	ScanProsite:PS00571	PANTHER:PTHR11895
PANTHER:PTHR11895:SF111	SUPFAM:SSF75304	UniParc:UPI0002963129	RefSeq:XP_015159038.1	SEG:seg	:

Description

Indole-3-acetamide hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400043451]

Coordinates

chr10:+:52002190..52003488

Molecular Weight (calculated)

46463.9 Da

IEP (calculated)

4.953

GRAVY (calculated)

0.057

Length

432 amino acids

Sequence
(BLAST)

001: MELEMEMEME SLKSCGAFMK RFTLEPIDSD SDELNGLTFA VKDIFDLEGQ ITGFGNPDWG KTHSAAKSTA PTVVSLLKSG ATCIGKTVMD EMAYSINGEN
101: FHYGTPVNPV APDRVPGGSS SGSAVAVGAK IVDFALGTDT GGSVRVPASY CGIYGIRPSH GVVSIDGVIP MAQSFDTVGW FARDARILKQ VGRVLIQSDH
201: KSKGLSKFIV AEDCFKLLDS KSNQQLIGIL VDSVRKLYGS DQMIKYVSIG EYIEENVPSL KKFMTIETCS NDYIPSSLRA LSAAMRLLQK YEFKENHGEW
301: VSDVKPSLGP GIAERVQDAL KTTIDEDIDV CRTVKTELLA ALSALLGDCG ILAIPTVPGP PPKLKTETTT LEGFRAKAFS LLSIAGVSGF CQVSIPLGIQ
401: DNLPISVSLL ANHGSDWFLL NVVEAIHNVL NL

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.