Factsheet for Solyc10g086170.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400093880	Potato	cytosol	92.25	90.97
VIT_14s0128g00320.t01	Wine grape	cytosol	65.49	64.43
Bra031652.1-P	Field mustard	cytosol	61.74	62.47
CDY06342	Canola	cytosol	61.74	62.32
CDY22653	Canola	cytosol	61.5	62.09
KRG92836	Soybean	cytosol	61.97	60.97
KRH33958	Soybean	cytosol	61.5	60.51
AT1G08980.1	Thale cress	cytosol	59.86	60.0
CDY03602	Canola	cytosol, plastid	42.02	58.5
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	54.23	55.26
TraesCS2D01G573300.1	Wheat	cytosol	56.81	53.9
EER97555	Sorghum	cytosol	55.16	53.78
Os04t0118100-01	Rice	cytosol	54.46	53.33
Zm00001d006886_P002	Maize	cytosol	55.4	53.15
TraesCS2B01G624200.1	Wheat	cytosol	55.16	52.22
TraesCS2A01G562400.1	Wheat	cytosol	55.87	52.19
HORVU6Hr1G060680.1	Barley	cytosol	19.25	51.57
Os04t0117900-01	Rice	plasma membrane, plastid	51.88	50.92
TraesCS2B01G603900.1	Wheat	cytosol	51.64	49.77
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	49.53	48.73
TraesCS5D01G083700.1	Wheat	cytosol	33.1	46.84
Solyc03g118690.2.1	Tomato	plastid	46.01	33.22
Solyc10g047300.1.1	Tomato	plastid	45.07	32.11
Solyc10g007840.2.1	Tomato	plastid	23.94	19.28
Solyc01g106340.2.1	Tomato	cytosol, golgi, plasma membrane	23.71	16.56
Solyc01g106330.2.1	Tomato	cytosol	21.6	14.89
Solyc01g106360.2.1	Tomato	plastid	21.13	14.8
Solyc01g106350.2.1	Tomato	cytosol	20.19	14.33
Solyc12g070080.1.1	Tomato	cytosol, plastid	4.69	13.42
Solyc03g118030.2.1	Tomato	plastid	16.9	11.54
Solyc06g068690.2.1	Tomato	extracellular	15.49	11.34
Solyc12g070090.1.1	Tomato	cytosol	1.88	3.7

Protein Annotations

KEGG:00970+6.3.5.7	MapMan:11.2.1.2.1	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009684	GO:GO:0009851	GO:GO:0009987	GO:GO:0016787
GO:GO:0016810	GO:GO:0043864	InterPro:IPR036928	UniProt:K4D450	PFAM:PF01425	ScanProsite:PS00571
PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	SUPFAM:SSF75304	EnsemblPlantsGene:Solyc10g086170.1	EnsemblPlants:Solyc10g086170.1.1	UniParc:UPI000276935B
SEG:seg	:	:	:	:	:

Description

Amidase 1 [Source:Projected from Arabidopsis thaliana (AT1G08980) UniProtKB/Swiss-Prot;Acc:Q9FR37]

Coordinates

chr10:-:65083307..65084587

Molecular Weight (calculated)

45645.9 Da

IEP (calculated)

5.021

GRAVY (calculated)

0.081

Length

426 amino acids

Sequence
(BLAST)

001: MEMESLKSCG AFMKKLRLEP IGSDSDELNG LTFAVKDIFD LEGQITGFGN PDWGKTHSAA ICTAPTVLSL LKSGATCIGI TVMDEMAYSI NGENFHYGTP
101: VNPVAPDRVP GGSSSGSAVA VGAKIVDFAL GTDTGGSVRV PASYCGIYGI RPSHGVVSVD GVIPMAQSFD TVGWFATNAC ILKQVGRVLL QSDHESKGLT
201: KFIVAEDCFK LLDSKSNRQT IGILVDSVRE LYGSDQMIEY VSIGDYIEKN VPSLKKFMTI ETCSNNNIPS SLRALSAAMR LLQKYEFKEN HGEWVSEVKP
301: SLGPGIAERV QEALRTTKDE DIDVCQTVKT ELRVSLSGLL GDCGILAIPT VPGPPPKLKT ETTTLEGFRA KAFSLLSIAG VSGFCQVSIP LGIQDNLPIS
401: VSLLANHGSD WFLLNVVEAI HNVLYL

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.