Factsheet for TraesCS2B01G603900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G573300.1	Wheat	cytosol	88.01	86.64
TraesCS2B01G624200.1	Wheat	cytosol	87.56	86.0
EER97555	Sorghum	cytosol	69.0	69.79
Os04t0118100-01	Rice	cytosol	68.55	69.66
Zm00001d006886_P002	Maize	cytosol	68.78	68.47
Os04t0117900-01	Rice	plasma membrane, plastid	65.38	66.59
HORVU2Hr1G126540.1	Barley	cytosol	48.87	63.53
VIT_14s0128g00320.t01	Wine grape	cytosol	54.98	56.12
Bra031652.1-P	Field mustard	cytosol	52.71	55.34
CDY22653	Canola	cytosol	52.71	55.21
CDY06342	Canola	cytosol	52.71	55.21
KRG92836	Soybean	cytosol	53.39	54.5
AT1G08980.1	Thale cress	cytosol	52.26	54.35
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	51.13	54.07
KRH33958	Soybean	cytosol	52.49	53.58
Solyc10g086170.1.1	Tomato	cytosol	49.77	51.64
CDY03602	Canola	cytosol, plastid	32.58	47.06
TraesCS6B01G349000.1	Wheat	plastid	38.69	28.08
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	34.84	26.28
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	22.17	18.11
TraesCS1B01G443700.1	Wheat	golgi	20.81	15.08
TraesCS2B01G053700.1	Wheat	mitochondrion, nucleus, peroxisome	19.91	14.29
TraesCS2B01G053800.1	Wheat	cytosol	19.23	13.96
TraesCS3B01G379500.5	Wheat	golgi, vacuole	17.42	12.09
PGSC0003DMT400031298	Potato	cytosol	0.9	2.5

Protein Annotations

EnsemblPlants:TraesCS2B01G603900.1	EnsemblPlantsGene:TraesCS2B01G603900	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	PFAM:PF01425	ScanProsite:PS00571	SEG:seg
SUPFAM:SSF75304	MapMan:11.2.1.2.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:785942985..785948237

Molecular Weight (calculated)

46819.8 Da

IEP (calculated)

5.639

GRAVY (calculated)

-0.059

Length

442 amino acids

Sequence
(BLAST)

001: MEMEANGDDH GAFMEKFLLP PSPSSDHQQP QQPPLHGLTF AIKDIFDVAG RVTGFGTPDW ARTHAPAAAT APAVLAALAA GATGVGKTVM DEMAYSINGE
101: NAHYGTPANP CAPGRVPGGS SSGSAVAVAA SLADFALGTD TGGSVRVPAA YCGIFGLRPS HGLVSTENVV PMAQMFDTVG WFARDLPTLS RVTDVMLPPV
201: PAAADDDAEI RRRRPSRVII PADCFKILGS SDDDHTYEIL NASAAKVFGS DAVVDNGNLG DFVSSNVPSI GKFMTDLSAV EASSSCVPPL SAISRVMRVL
301: QRSEFKSNHA EWFNTVKPNL GPGIRERVQE AIASEDESAM DDLHAVRTEF KSALATLLKD DKILAIPTVP GAPPKLCMDA ALLEDFRARA FSLLSIAGLS
401: GFCQMKDPEK KMLTLGAKLI EWVSNKVYRA SQGWRPRVRL GG

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.