Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- endoplasmic reticulum 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G413700.1 | Wheat | golgi | 98.52 | 98.69 |
| TraesCS1D01G421100.1 | Wheat | golgi | 98.03 | 98.03 |
| HORVU1Hr1G090770.2 | Barley | endoplasmic reticulum, golgi, plasma membrane | 97.87 | 98.03 |
| Os12t0169000-00 | Rice | plasma membrane | 83.44 | 85.83 |
| Zm00001d023543_P003 | Maize | cytosol, endoplasmic reticulum, peroxisome | 82.95 | 80.32 |
| KXG23065 | Sorghum | plastid | 84.59 | 69.35 |
| VIT_07s0031g02700.t01 | Wine grape | golgi | 64.59 | 64.59 |
| KRH40976 | Soybean | golgi | 62.95 | 63.05 |
| KRH59629 | Soybean | golgi | 62.13 | 62.34 |
| KRH53966 | Soybean | cytosol, golgi, peroxisome | 62.3 | 61.19 |
| GSMUA_Achr2P20550_001 | Banana | mitochondrion | 71.8 | 61.09 |
| KRH63971 | Soybean | cytosol, golgi, peroxisome | 61.97 | 60.97 |
| Solyc12g070080.1.1 | Tomato | cytosol, plastid | 13.77 | 56.38 |
| Solyc12g070090.1.1 | Tomato | cytosol | 16.72 | 47.22 |
| TraesCS2B01G053700.1 | Wheat | mitochondrion, nucleus, peroxisome | 42.46 | 42.05 |
| TraesCS2B01G053800.1 | Wheat | cytosol | 41.8 | 41.87 |
| TraesCS2B01G549500.1 | Wheat | mitochondrion, plastid | 23.61 | 26.62 |
| TraesCS2B01G624200.1 | Wheat | cytosol | 15.57 | 21.11 |
| TraesCS2B01G603900.1 | Wheat | cytosol | 15.08 | 20.81 |
| TraesCS4B01G043200.1 | Wheat | endoplasmic reticulum | 17.87 | 18.6 |
| TraesCS6B01G349000.1 | Wheat | plastid | 18.03 | 18.06 |
| TraesCS3B01G379500.5 | Wheat | golgi, vacuole | 18.85 | 18.05 |
| Bra022265.1-P | Field mustard | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G443700.1 | EnsemblPlantsGene:TraesCS1B01G443700 | Gene3D:3.90.1300.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004040 |
| GO:GO:0016787 | InterPro:AS_sf | InterPro:Amidase | InterPro:Amidase_dom | InterPro:IPR036928 | KEGG:00970+6.3.5.7 |
| PANTHER:PTHR11895 | PANTHER:PTHR11895:SF135 | PFAM:PF01425 | SEG:seg | SUPFAM:SSF75304 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1B:+:664799886..664805926
Molecular Weight (calculated)
65592.0 Da
IEP (calculated)
7.203
GRAVY (calculated)
0.016
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFGSSAKV YRPAPEVDLG PGSAELYISP NVKAPRVAGM LVKIFVWVLE MPVVGWVLLH ILKKDNLINK LVSEAEIPEP PLFTSTHRWE DTPEQNVSLT
101: KPGLSPAERV REAVDCLPAR LESTLAADAP PSSSLKRWTI MDFSRAYSSG ETTPVQVAKR FLAAVKESSG PTMNMAFFIS CNPEDVLKQA EESTLRYQTG
201: TPLSVMDGVL VAVKDEIDCL PYPTTGGTRW LGKARPCEAD AACVAQLRAC GAVLAGKTNM HELGAGTSGI NPHHGSARNP YNVGKVAGGS SSGSAAVVCA
301: GLCPVALGVD GGGSVRMPAA LCGVVGFKPT AGRLSNAGVL PLNWTVGMAG ILAGTVEDAV VAYSAIVDQS QPSYLRPELN LPMLTSTPSI SNVRLAKYGK
401: WFNDSSEDIR TCCDKALQTL HAQYGWETLD VTVPEIEEMR LAHYVTIGSE CTASLAKYLD KLKRSEIGWD VRVALAVYGS FSSRAYLNSQ RLRNRQMFFH
501: KEIFKTADVI VSPMTGVTAY TLQDDALSSG ELDYINGAAL IRYSIAGNFL GLPAITVMVG QDKGGLPIGL QFIGRPWSEA TLLHIAFAMQ EACSKNHRKP
601: VVFYDLLKKD
101: KPGLSPAERV REAVDCLPAR LESTLAADAP PSSSLKRWTI MDFSRAYSSG ETTPVQVAKR FLAAVKESSG PTMNMAFFIS CNPEDVLKQA EESTLRYQTG
201: TPLSVMDGVL VAVKDEIDCL PYPTTGGTRW LGKARPCEAD AACVAQLRAC GAVLAGKTNM HELGAGTSGI NPHHGSARNP YNVGKVAGGS SSGSAAVVCA
301: GLCPVALGVD GGGSVRMPAA LCGVVGFKPT AGRLSNAGVL PLNWTVGMAG ILAGTVEDAV VAYSAIVDQS QPSYLRPELN LPMLTSTPSI SNVRLAKYGK
401: WFNDSSEDIR TCCDKALQTL HAQYGWETLD VTVPEIEEMR LAHYVTIGSE CTASLAKYLD KLKRSEIGWD VRVALAVYGS FSSRAYLNSQ RLRNRQMFFH
501: KEIFKTADVI VSPMTGVTAY TLQDDALSSG ELDYINGAAL IRYSIAGNFL GLPAITVMVG QDKGGLPIGL QFIGRPWSEA TLLHIAFAMQ EACSKNHRKP
601: VVFYDLLKKD
001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA
Arabidopsis Description
GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.