Factsheet for Solyc12g070080.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P18290_001	Banana	plastid	30.87	17.62
VIT_07s0031g02700.t01	Wine grape	golgi	65.77	16.07
OQU82976	Sorghum	peroxisome	55.7	15.63
HORVU4Hr1G019600.11	Barley	cytosol	60.4	14.88
KRH59629	Soybean	golgi	59.73	14.64
TraesCS4A01G206800.1	Wheat	cytosol	59.06	14.55
KRH40976	Soybean	golgi	59.06	14.45
Os11t0170000-01	Rice	peroxisome	59.06	14.43
TraesCS4D01G108100.1	Wheat	cytosol	58.39	14.38
Os12t0169000-00	Rice	plasma membrane	57.05	14.33
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	60.4	14.29
TraesCS1A01G413700.1	Wheat	golgi	57.05	13.96
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	57.05	13.96
TraesCS1D01G421100.1	Wheat	golgi	57.05	13.93
KRH53966	Soybean	cytosol, golgi, peroxisome	57.72	13.85
TraesCS1B01G443700.1	Wheat	golgi	56.38	13.77
KRH63971	Soybean	cytosol, golgi, peroxisome	56.38	13.55
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	55.03	13.14
GSMUA_Achr2P20550_001	Banana	mitochondrion	58.39	12.13
KXG23065	Sorghum	plastid	58.39	11.69
Solyc01g106340.2.1	Tomato	cytosol, golgi, plasma membrane	36.91	9.02
Solyc01g106330.2.1	Tomato	cytosol	36.91	8.9
Solyc01g106360.2.1	Tomato	plastid	34.9	8.55
Solyc01g106350.2.1	Tomato	cytosol	34.23	8.5
Solyc10g007840.2.1	Tomato	plastid	18.79	5.29
Solyc10g086170.1.1	Tomato	cytosol	13.42	4.69
Solyc06g068690.2.1	Tomato	extracellular	16.78	4.3
Solyc03g118030.2.1	Tomato	plastid	14.09	3.37
Solyc03g118690.2.1	Tomato	plastid	12.75	3.22
Os02t0519900-01	Rice	nucleus, plasma membrane, plastid	16.11	2.85
Os04t0118400-01	Rice	extracellular	15.44	2.73
Solyc10g047300.1.1	Tomato	plastid	9.4	2.34
CDX69906	Canola	cytosol, plastid	9.4	2.32
Solyc12g070090.1.1	Tomato	cytosol	0.0	0.0
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0
Os11t0170200-01	Rice	nucleus	0.0	0.0
CDX69905	Canola	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc12g070080.1.1	EnsemblPlantsGene:Solyc12g070080.1	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:IPR036928	KEGG:00970+6.3.5.7	PANTHER:PTHR11895
PANTHER:PTHR11895:SF135	SUPFAM:SSF75304	UniParc:UPI000276A694	UniProt:K4DGD1	MapMan:35.1	:

Description

No Description!

Coordinates

chr12:-:29100555..29102873

Molecular Weight (calculated)

16754.0 Da

IEP (calculated)

5.692

GRAVY (calculated)

-0.215

Length

149 amino acids

Sequence
(BLAST)

001: MVGILAGTVE DALLVYAAIS GPNSSHHSQT ALPKLYFPLL KSPRPMPNIR LAKYGEWFND CNEEIRVCCS RALEKLRDNY GWETIQVTIP ELEVMRLAHY
101: VTIGSECSTS IGPELEKMNK DEVGWDARVA VSVYGSFSSQ EYLNAQRIR

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.