Factsheet for Os12t0169000-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G421100.1	Wheat	golgi	86.17	83.77
TraesCS1A01G413700.1	Wheat	golgi	86.0	83.74
TraesCS1B01G443700.1	Wheat	golgi	85.83	83.44
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	85.67	83.42
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	83.14	78.25
Os11t0170000-01	Rice	peroxisome	76.22	74.1
KXG23065	Sorghum	plastid	84.32	67.2
VIT_07s0031g02700.t01	Wine grape	golgi	63.91	62.13
GSMUA_Achr2P20550_001	Banana	mitochondrion	74.2	61.37
KRH40976	Soybean	golgi	62.9	61.25
KRH59629	Soybean	golgi	62.06	60.53
KRH63971	Soybean	cytosol, golgi, peroxisome	61.89	59.19
KRH53966	Soybean	cytosol, golgi, peroxisome	61.89	59.1
Solyc12g070080.1.1	Tomato	cytosol, plastid	14.33	57.05
Solyc12g070090.1.1	Tomato	cytosol	16.36	44.91
Os04t0102700-01	Rice	plasma membrane	43.17	42.11
Os04t0643200-00	Rice	plastid	22.26	24.72
Os04t0117900-01	Rice	plasma membrane, plastid	16.53	22.58
Os04t0118100-01	Rice	cytosol	16.19	22.07
Os03t0707900-01	Rice	plasma membrane	17.88	18.09
Os11t0536800-01	Rice	golgi, plastid	19.56	17.34
Os02t0754500-01	Rice	cytosol, mitochondrion, plastid	17.88	17.29
Os04t0118400-01	Rice	extracellular	15.68	11.03
Os02t0519900-01	Rice	nucleus, plasma membrane, plastid	15.68	11.03
Os11t0170200-01	Rice	nucleus	1.01	0.67
Os04t0102600-01	Rice	mitochondrion	0.0	0.0
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	UniProt:A0A0P0Y7J9	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	ProteinID:BAT16054.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:IPR036928	EnsemblPlantsGene:Os12g0169000	EnsemblPlants:Os12t0169000-00
PFAM:PF01425	PANTHER:PTHR11895	PANTHER:PTHR11895:SF135	SUPFAM:SSF75304	TMHMM:TMhelix	UniParc:UPI000393B06F
SEG:seg	:	:	:	:	:

Description

Similar to Amidase family protein, expressed. (Os12t0169000-00)

Coordinates

chr12:-:3503313..3509337

Molecular Weight (calculated)

63835.9 Da

IEP (calculated)

7.212

GRAVY (calculated)

0.008

Length

593 amino acids

Sequence
(BLAST)

001: MAAKVYKPAA EVNLGPDSDE FYISPNVKAP RVAGLLVKIF VWILEMPIIG SMVLYILKKD NLINKLVQDA EIPEPPLFTS THSWEDIPEQ NVCLTKPDLS
101: PPERVQEAVS CLPASLESTL AGSPPSSPKR WTIRDFNRAY SSGEVTPVQV AKRFLAAVKE CSGPGLNMAF FISYSPEDII RQAEESTLRY QRGTPLSAMD
201: GILVAVKDEI DCLPYPTTGG TRWLGRARAC AADAAVVAQL RACGAVLAGK TNMHELGAGT SGINPHHGST RNPHNPGRVS GGSSSGSAAA VCAGLCPVAL
301: GVDGGGSVRM PAALCGVVGF KPTAGRLSNA GVLPLNWTVG MPGILAGTVE DAAVAYSAIV DQSQPSYLRP ELNLPLLKSS LSIKNIKLAK YAKWFNDSSE
401: DIRSCCDKSL QMLHAHYGWE TLDVTIPEIE EMRLAHYVTI GSECTASLAK YLDKLKRSEI GWDVRVALGV YGSFSSRAYL NSQRLRNRQM YFHKEIFKTA
501: DVIVSPMTGV TAYKLQDDAL KSGELDYING AALVRYSIAG NFLGLPAITV MVGYDKAGLP IGLQFIGRPW SEATLLHIAF AMQASVQEAL QEA

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.