CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	76.48	90.32
TraesCS1A01G413700.1	Wheat	golgi	69.49	84.89
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	69.35	84.73
TraesCS1B01G443700.1	Wheat	golgi	69.35	84.59
Os12t0169000-00	Rice	plasma membrane	67.2	84.32
TraesCS1D01G421100.1	Wheat	golgi	68.95	84.1
OQU82976	Sorghum	peroxisome	53.36	74.76
GSMUA_Achr2P20550_001	Banana	mitochondrion	63.44	65.83
VIT_07s0031g02700.t01	Wine grape	golgi	52.82	64.43
KRH59629	Soybean	golgi	51.21	62.66
KRH40976	Soybean	golgi	50.67	61.9
KRH63971	Soybean	cytosol, golgi, peroxisome	50.81	60.97
KRH53966	Soybean	cytosol, golgi, peroxisome	50.81	60.87
Solyc12g070080.1.1	Tomato	cytosol, plastid	11.69	58.39
Solyc12g070090.1.1	Tomato	cytosol	13.58	46.76
EES11732	Sorghum	cytosol, nucleus, plastid	36.16	43.53
EES11532	Sorghum	plastid	19.09	26.25
EER97555	Sorghum	cytosol	12.63	21.51
KXG30729	Sorghum	plastid	14.92	18.08
KXG28572	Sorghum	golgi	15.73	17.75
EER91017	Sorghum	endoplasmic reticulum, golgi	13.17	16.67
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	UniProt:A0A1B6PC50	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	InterPro:IPR036928	EnsemblPlants:KXG23065	ProteinID:KXG23065	ProteinID:KXG23065.1
PFAM:PF01425	PANTHER:PTHR11895	PANTHER:PTHR11895:SF135	MetaCyc:PWY-5921	EnsemblPlantsGene:SORBI_3008G052000	SUPFAM:SSF75304
TMHMM:TMhelix	UniParc:UPI00081AE72A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:5237490..5243029

Molecular Weight (calculated)

80055.5 Da

IEP (calculated)

8.195

GRAVY (calculated)

-0.092

Length

744 amino acids

Sequence
(BLAST)

001: MRIATRNASR ETGDQSKAIY NLVSYPSLTL SLPSSSSSAN SPSSSCLVYP FRPVLCPFSG LTLHPHQEKR NRSSSSSFLP SFFPRHYRRI KAPTLGQPDH
101: TTNSRPQSRS PYLSICLSDC LPLSSSSPGM GLFSSPPKVY KPAADVDLGA GSDEFYISPN VKAPRVAGLL VKIFVWILEM PIVGPIVLYI LKKDNLINKL
201: VSDADIPEPP LFTATHSWED IPEQNVRLTK PDLSAAERVQ EAVGCLPARL EATLAADAPS VGLRRWTVRD FHDAYRSGET TPVQVATRFL AAVRESSSSA
301: GPAGMNMAFF ISCDHDDVMR QAEESTLRYQ RGAPLSALDG VLVGVKDEID CVPYPTTGGT RWLGAARRCE ADAACVAQLR ACGAVLAGKA NMHELGAGTS
401: GINPHHGSTR NPYNASKVAG GSSSGSAAVV CAGLCPVALG VDGGGSVRMP AALCGVVGFK PTAGRLSNAG VLPLNWTVGM PGILAGTVED ALIAYSAIVD
501: QSQPSYLRPE LNLPQLSSTP SIGNIKLAKY GKWFNDSAED IRSCCDKALQ ALHAHYGWQT VDVTIPEIEE MRLAHYVTIG SECTTSLAKY LDNLKRSEIG
601: WDARVALSVY GSFSSRAYLN SQRLRNRQMY FHKQIFKTAD VIVSPMTGVT AYTLQDDALN TGELDYINGA ALVRYSIAGN FLGLPAITVK VGYDRGGLPI
701: GLQFIGRPWS EATLLHVAFA TQQACADGYK KPAVFYDLLT KQHQ

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.