CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 4
golgi 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052660_P002	Maize	mitochondrion	89.53	89.8
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	77.69	80.38
TraesCS3B01G379500.5	Wheat	golgi, vacuole	77.54	80.22
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	77.85	80.03
Os11t0536800-01	Rice	golgi, plastid	79.97	78.77
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	77.24	76.54
VIT_00s0283g00010.t01	Wine grape	mitochondrion	19.42	74.42
VIT_15s0024g00980.t01	Wine grape	cytosol	60.85	73.58
KRH41039	Soybean	mitochondrion	51.29	69.26
VIT_15s0024g01020.t01	Wine grape	cytosol	59.03	68.49
KRH59711	Soybean	plasma membrane	63.88	68.01
Solyc06g068690.2.1	Tomato	extracellular	59.33	67.18
VIT_15s0024g01010.t01	Wine grape	endoplasmic reticulum, golgi	63.28	66.72
PGSC0003DMT400036918	Potato	plastid	59.94	63.3
Solyc03g118030.2.1	Tomato	plastid	58.73	62.02
Bra009269.1-P	Field mustard	plastid	60.7	61.82
CDX70030	Canola	plastid	60.7	61.82
CDX98979	Canola	plastid	60.55	61.48
AT5G07360.1	Thale cress	plastid	61.0	61.0
EES11532	Sorghum	plastid	17.75	21.63
OQU82976	Sorghum	peroxisome	14.26	17.7
EER97555	Sorghum	cytosol	11.68	17.62
EES11732	Sorghum	cytosol, nucleus, plastid	16.39	17.48
KXG23065	Sorghum	plastid	17.75	15.73
KXG30729	Sorghum	plastid	13.35	14.33
EER91017	Sorghum	endoplasmic reticulum, golgi	12.29	13.78

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	UniProt:A0A1B6PSC3	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0016787	InterPro:IPR036928
EnsemblPlants:KXG28572	ProteinID:KXG28572	ProteinID:KXG28572.1	PFAM:PF01425	PANTHER:PTHR11895	PANTHER:PTHR11895:SF73
MetaCyc:PWY-5921	EnsemblPlantsGene:SORBI_3005G139300	SUPFAM:SSF75304	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00081AB313
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:59397196..59401982

Molecular Weight (calculated)

72154.2 Da

IEP (calculated)

8.196

GRAVY (calculated)

-0.214

Length

659 amino acids

Sequence
(BLAST)

001: MRPPRRPRPT PPPSSSSRPL LHLLVVVSVL CFATPAPAAA VAAAAATGGT GGAGGEGGVI RTRTAAVARF AMAWPSKCKW LPLPTSGRCP SYTLVSKYHK
101: IWKDTKPFIS AKDVLKKEPI SDVIALKDSM KYFDAAFFND SKLREMQDGA KEFNVPAFRE NRKLVASENG GLHNPSVLLF KSSWSSDSMT SETRSFEYPR
201: VSSVHRPTND EDIAFMSVIE LGELIRTKQI TSCELTDIFL MRLKRYNPVL EAVVTYTEDL AYKQAKEADD LLAQGKYLGP LHGIPYGLKD IIAVPHYKTT
301: WGSRTFKNQV IDSEAYVYKR LKSAGAVLVA KLVTGSLAYD DIWFGGRTRN PWNIEEFSTG SSAGPAASTS AGMVPFAIGS ETAGSITYPA ARCGVTALRP
401: TFGTVARTDV MSISESLDKL GPFCRSAVDC AIVLDAIRGK DAGDPSSREV ALGDPFHVDI TKLTVGYLDD AEMEVVHVLS SKGVKLVPFK LNYTVESVQS
501: ILNITMDTDM LAHFDNWQRE GHDDDYEAQD QWPVELRRAR LIPAVDYIQA QRARGKLIRE IKDSFTVDAF VGNVTDWERV CLGNLVGMPV VVVPTGLKSI
601: EDPPKGGTKR RTTVTTGIYA PPDHDHIALA LAMAYQSVTN HNKQRPPIDD LGPNDGIHR

Best Arabidopsis Sequence Match ( AT5G07360.3 )
(BLAST)

001: MARPSIATCD PSARPCLATR GSLPRSRTCA PLLFLCLLLG LTVFCADANP SDSKLLCSRL LPCEPSIEMV RNCKNLWKLL DRKVSVPCRK ITTLTRTVTL
101: TELPDKTMEA KCLQGMFELI DSAFFNETKL QEIAKGATEM NVPIYRANRK LVATKNGGLE NPSPLVFNPS WNREVQRVQD KRFKYPSASG VKLPRDEEDI
201: AFMSVLELGE LIKTRQITSK ELVRIYLKQL KRYNHVLEAV VTYTEELAYK QAKEADDLLS QGTYLGPLHG IPYGLKDIVA VPGYKTTWGS TSFKDQFLDI
301: EAWVYKRLKA SGAVLVAKLV TGSMAYDDIW FGGRTRNPWN IEEFSTGSSA GPAASTSAGM VPFAIGSETA GSMTYPAARC GITALRPTFG SVGRTGVMSI
401: SESLDKLGPF CRTAADCAVI LDAIKGKDPD DLSSREIAFE DPFSVDITKL TVGYTKDADM KVVEVLGSKG VNMVPFELNY TVESVQGILN FTMDVDMLAH
501: FDEWQRTGQE DLYEAQDQWP VELRRARVVT AVDYIQAQRA RGKLIREVEK SFTVDAFIGN VTDWEKVCMG NLVGLPVLVI PTGFKNITDP PTNSCRRRTT
601: INAGIYAPPE RDHIALALGM AYQSVTDAHR KRPPIDDLGP DDSIPNPPRA LIPPRRLHI

Arabidopsis Description

Amidase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6N3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.