Factsheet for VIT_00s0283g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0024g00980.t01	Wine grape	cytosol	76.74	24.22
VIT_15s0024g01020.t01	Wine grape	cytosol	74.42	22.54
VIT_15s0024g01010.t01	Wine grape	endoplasmic reticulum, golgi	78.49	21.6
Solyc06g068690.2.1	Tomato	extracellular	68.6	20.27
KRH59711	Soybean	plasma membrane	72.09	20.03
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	72.09	19.47
KXG28572	Sorghum	golgi	74.42	19.42
TraesCS3B01G379500.5	Wheat	golgi, vacuole	71.51	19.31
Solyc03g118030.2.1	Tomato	plastid	69.77	19.23
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	71.51	19.19
Zm00001d052660_P002	Maize	mitochondrion	73.26	19.18
CDX70030	Canola	plastid	72.09	19.17
Bra009269.1-P	Field mustard	plastid	72.09	19.17
CDX98979	Canola	plastid	71.51	18.95
PGSC0003DMT400036918	Potato	plastid	68.6	18.91
AT5G07360.1	Thale cress	plastid	71.51	18.66
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	70.93	18.35
KRH41039	Soybean	mitochondrion	50.58	17.83
Os11t0536800-01	Rice	golgi, plastid	68.6	17.64
VIT_12s0028g01330.t01	Wine grape	mitochondrion	19.19	6.04
VIT_07s0031g02700.t01	Wine grape	golgi	20.93	5.9
VIT_14s0128g00320.t01	Wine grape	cytosol	14.53	5.77
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	19.19	5.44
VIT_12s0028g00300.t01	Wine grape	cytosol	15.12	4.28
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	13.37	3.9

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.2	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom
ProteinID:CBI35620	ProteinID:CBI35620.3	UniProt:D7TYP4	EMBL:FN596273	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0016787	InterPro:IPR036928	PFAM:PF01425	PANTHER:PTHR11895	PANTHER:PTHR11895:SF73
SUPFAM:SSF75304	TIGR:TC52271	UniParc:UPI0001BE4210	ArrayExpress:VIT_00s0283g00010	EnsemblPlantsGene:VIT_00s0283g00010	EnsemblPlants:VIT_00s0283g00010.t01

Description

No Description!

Coordinates

chrUn:+:21140636..21143756

Molecular Weight (calculated)

19845.0 Da

IEP (calculated)

9.571

GRAVY (calculated)

-0.298

Length

172 amino acids

Sequence
(BLAST)

001: MHHHTFLTRT THGIKKFKCF VYKIVDVHQI IELGELIKTK QITSEELTQN FLHRLKRYNH VLEAVVTYTE ELAYKQAKEA NEMLAQGIYL GPLHGIPYGL
101: KDIISVPQYK TTWGSKTFKD QVLNIEAWVY KRLKSSGAVL VAKLVSGSLA YDDIWFGGRT RNPWNIEEYS TG

Best Arabidopsis Sequence Match ( AT5G07360.2 )
(BLAST)

001: MARPSIATCD PSARPCLATR GSLPRSRTCA PLLFLCLLLG LTVFCADANP SDSKLLCSRL LPCEPSIEMV RNCKNLWKLL DRKVSVPCRK ITTLTRTVTL
101: TELPDKTMEA KCLQGMFELI DSAFFNETKL QEIAKGATEM NVPIYRANRK LVATKNGGLE NPSPLVFNPS WNREVQRVQD KRFKYPSASG VKLPRDEEDI
201: AFMSVLELGE LIKTRQITSK ELVRIYLKQL KRYNHVLEAV VTYTEELAYK QAKEADDLLS QGTYLGPLHG IPYGLKDIVA VPGYKTTWGS TSFKDQFLDI
301: EAWVYKRLKA SGAVLVAKLV TGSMAYDDIW FGGRTRNPWN IEEFSTGSSA GPAASTSAGS ETAGSMTYPA ARCGITALRP TFGSVGRTGV MSISESLDKL
401: GPFCRTAADC AVILDAIKGK DPDDLSSREI AFEDPFSVDI TKLTVGYTKD ADMKVVEVLG SKGVNMVPFE LNYTVESVQG ILNFTMDVDM LAHFDEWQRT
501: GQEDLYEAQD QWPVELRRAR VVTAVDYIQA QRARGKLIRE VEKSFTVDAF IGNVTDWEKV CMGNLVGLPV LVIPTGFKNI TDPPTNSCRR RTTINAGIYA
601: PPERDHIALA LGMAYQSVTD AHRKRPPIDD LGPDDSIPNP PRALIPPRRL HI

Arabidopsis Description

Amidase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6N3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.