Factsheet for VIT_15s0024g01010.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 4
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0024g00980.t01	Wine grape	cytosol	81.12	93.03
VIT_15s0024g01020.t01	Wine grape	cytosol	82.72	91.02
VIT_00s0283g00010.t01	Wine grape	mitochondrion	21.6	78.49
KRH41039	Soybean	mitochondrion	56.64	72.54
KRH59711	Soybean	plasma membrane	68.96	69.63
Solyc06g068690.2.1	Tomato	extracellular	64.64	69.42
Solyc03g118030.2.1	Tomato	plastid	66.88	66.99
PGSC0003DMT400036918	Potato	plastid	66.56	66.67
CDX98979	Canola	plastid	65.92	63.48
TraesCS3B01G379500.5	Wheat	golgi, vacuole	64.64	63.42
Bra009269.1-P	Field mustard	plastid	65.6	63.37
CDX70030	Canola	plastid	65.6	63.37
KXG28572	Sorghum	golgi	66.72	63.28
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	64.16	62.95
Zm00001d052660_P002	Maize	mitochondrion	66.08	62.86
AT5G07360.1	Thale cress	plastid	66.08	62.67
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	63.84	62.25
Os11t0536800-01	Rice	golgi, plastid	65.12	60.84
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	64.64	60.75
VIT_12s0028g01330.t01	Wine grape	mitochondrion	18.56	21.25
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	18.56	19.11
VIT_14s0128g00320.t01	Wine grape	cytosol	12.96	18.71
VIT_07s0031g02700.t01	Wine grape	golgi	17.6	18.03
VIT_12s0028g00300.t01	Wine grape	cytosol	14.24	14.66
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	12.96	13.73

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:100260952	wikigene:100260952	Gene3D:3.90.1300.10	MapMan:35.1	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_dom	ProteinID:CBI39990	ProteinID:CBI39990.3	UniProt:D7UB66	EMBL:FN596748
GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0016787	InterPro:IPR036928	EntrezGene:LOC100260952
wikigene:LOC100260952	PFAM:PF01425	PANTHER:PTHR11895	PANTHER:PTHR11895:SF73	SUPFAM:SSF75304	TIGR:TC58607
UniParc:UPI0001BE55A4	ArrayExpress:VIT_15s0024g01010	EnsemblPlantsGene:VIT_15s0024g01010	EnsemblPlants:VIT_15s0024g01010.t01	unigene:Vvi.12498	RefSeq:XP_002270353
RefSeq:XP_002270353.2	RefSeq:XP_010661164.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr15:-:2008819..2012857

Molecular Weight (calculated)

68482.8 Da

IEP (calculated)

4.929

GRAVY (calculated)

-0.108

Length

625 amino acids

Sequence
(BLAST)

001: MLGGILRPTS LSLARIRLLY YFCLLCLISS NRLLAGTGAI MDSGEYSPKS NGECSEKINE VLPVKCAFAI FDADFFNDTK IAEIEQGATE LNIPISRANR
101: KLVASVNGGL HDPSYLVFNP GWGNEQVQSK TKRFSCPSLS GIQRPEGEED IAFMTVLELG ELIKTKQITS EELTQIFLHR LKRYNLVLEA VVTYTEELAY
201: KQAKEADEML ARGIYLGPLH GIPYGLKDII SVPQYKTTWG SKTFKDQVLD IEASVYKKLK SAGAVLVAKL ATGSLAYDDI WFGGRTRNPW NIEEYSTGSS
301: SGPAASTSAG MVPFAIGSET CGSITYPAAR CGVTALRPTF GAVGRTGVMS ISESLDKIGP FCRSAADCTI ILDAILGKDP DDPSSKDISL DDPFSVDITN
401: LTVGYLDDAE MEVVRILESK GVKMVPFKLN YTVSHVQGIL NFTMDVDMLA HFDEWQRSGE DDFYEAQDQW PVELRRARMI PAVDYVQAQR ARGKLIREIR
501: ESFTVDAFIG NATDWEKVCL GNLVGMPVLI IPTGFTKISS PPPDGSRRRT TITTGIYAPP NHDHVALALA MAYQSVTEHH RQRPPIDDLG PNDFIVDSIS
601: TPDYLSSQTI PCLEGSVPSG SAVTM

Best Arabidopsis Sequence Match ( AT5G07360.3 )
(BLAST)

001: MARPSIATCD PSARPCLATR GSLPRSRTCA PLLFLCLLLG LTVFCADANP SDSKLLCSRL LPCEPSIEMV RNCKNLWKLL DRKVSVPCRK ITTLTRTVTL
101: TELPDKTMEA KCLQGMFELI DSAFFNETKL QEIAKGATEM NVPIYRANRK LVATKNGGLE NPSPLVFNPS WNREVQRVQD KRFKYPSASG VKLPRDEEDI
201: AFMSVLELGE LIKTRQITSK ELVRIYLKQL KRYNHVLEAV VTYTEELAYK QAKEADDLLS QGTYLGPLHG IPYGLKDIVA VPGYKTTWGS TSFKDQFLDI
301: EAWVYKRLKA SGAVLVAKLV TGSMAYDDIW FGGRTRNPWN IEEFSTGSSA GPAASTSAGM VPFAIGSETA GSMTYPAARC GITALRPTFG SVGRTGVMSI
401: SESLDKLGPF CRTAADCAVI LDAIKGKDPD DLSSREIAFE DPFSVDITKL TVGYTKDADM KVVEVLGSKG VNMVPFELNY TVESVQGILN FTMDVDMLAH
501: FDEWQRTGQE DLYEAQDQWP VELRRARVVT AVDYIQAQRA RGKLIREVEK SFTVDAFIGN VTDWEKVCMG NLVGLPVLVI PTGFKNITDP PTNSCRRRTT
601: INAGIYAPPE RDHIALALGM AYQSVTDAHR KRPPIDDLGP DDSIPNPPRA LIPPRRLHI

Arabidopsis Description

Amidase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6N3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.