Factsheet for TraesCS3B01G379500.5

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	95.76	95.16
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	94.82	94.82
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	92.46	88.57
KXG28572	Sorghum	golgi	80.22	77.54
Os11t0536800-01	Rice	golgi, plastid	80.22	76.38
Zm00001d052660_P002	Maize	mitochondrion	76.3	73.97
VIT_00s0283g00010.t01	Wine grape	mitochondrion	19.31	71.51
VIT_15s0024g00980.t01	Wine grape	cytosol	60.6	70.83
KRH41039	Soybean	mitochondrion	50.71	66.19
Solyc06g068690.2.1	Tomato	extracellular	59.65	65.29
VIT_15s0024g01020.t01	Wine grape	cytosol	57.93	64.96
VIT_15s0024g01010.t01	Wine grape	endoplasmic reticulum, golgi	63.42	64.64
KRH59711	Soybean	plasma membrane	62.32	64.14
PGSC0003DMT400036918	Potato	plastid	60.44	61.7
Solyc03g118030.2.1	Tomato	plastid	59.81	61.06
Bra009269.1-P	Field mustard	plastid	61.54	60.59
CDX70030	Canola	plastid	61.54	60.59
CDX98979	Canola	plastid	61.7	60.55
AT5G07360.1	Thale cress	plastid	61.22	59.18
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	17.74	20.89
TraesCS1B01G443700.1	Wheat	golgi	18.05	18.85
TraesCS2B01G624200.1	Wheat	cytosol	12.56	17.78
TraesCS2B01G603900.1	Wheat	cytosol	12.09	17.42
TraesCS2B01G053800.1	Wheat	cytosol	16.17	16.91
TraesCS2B01G053700.1	Wheat	mitochondrion, nucleus, peroxisome	16.17	16.72
TraesCS6B01G349000.1	Wheat	plastid	14.13	14.78
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	11.3	12.29

Protein Annotations

EnsemblPlants:TraesCS3B01G379500.5	EnsemblPlantsGene:TraesCS3B01G379500	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928	KEGG:00970+6.3.5.7
PANTHER:PTHR11895	PANTHER:PTHR11895:SF73	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF75304
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:597450444..597454542

Molecular Weight (calculated)

70196.1 Da

IEP (calculated)

8.032

GRAVY (calculated)

-0.214

Length

637 amino acids

Sequence
(BLAST)

001: MRIPRGHRRP PPCLHHLLLL LVALCFAALK TAAAAPSTGG TGEGGGGIAS VTGSIMTWAT WPPKCAWLPL RMSGKSHSYT LVSKYHKIWK AKDAISAKDI
101: SRKEPVGGVI ALKESMKYFD ADFFNDSKLR EMENGAKEFN VPAFRENRRL VAMKDGGLHD PSVLVFKSSW SSKSKVKESE MFDCPQTSMT QRPSNDEDIA
201: FMSIIELGEL FRTKKITSHE LTDVFLRRLK RYGAVLESVI TYTEELAYKQ AKEADDLLEQ GKYLGPLHGI PYGLKDIIAV PQYNTTWGSK TFKNQVIDME
301: AFVYKRLKSA GAVLVAKLVT GSLAYDDIWF GGRTRNPWNI EEFSTGSSAG PTASTSAGMV PFAIGSETAG SITYPAARCG VTALRPSFGT VARTGVMSLS
401: ESLDKLGPFC RSAADCAIVL DAIRGSDPGD PSSREIALED PFHVDITKLT VGYLDSAEME VVKVLSAKGA KFVPFKLNYT VESVQSILNI TMDVDMLAHF
501: DNWQREGHDD DYEAQDQWPV ELRRARLVPA VDYVQAQRAR GRLIREVRES FTVDAFIGNV TDWELVCLGN LVGLPIVVVP TGFKSIEHPP KGNTRRRTTV
601: TTGIYAPPDH DHIALALAMA YQSVTDHHKQ RPPIDAN

Best Arabidopsis Sequence Match ( AT5G07360.1 )
(BLAST)

001: MARPSIATCD PSARPCLATR GSLPRSRTCA PLLFLCLLLG LTVFCADANP SDSKLLCSRL LPCEPSIEMV RNCKNLWKLL DRKVSVPCRK ITTLTRTVTL
101: TELPDKTMEA KCLQGMFELI DSAFFNETKL QEIAKGATEM NVPIYRANRK LVATKNGGLE NPSPLVFNPS WNREVQRVQD KRFKYPSASG VKLPRDEEDI
201: AFMSVLELGE LIKTRQITSK ELVRIYLKQL KRYNHVLEAV VTYTEELAYK QAKEADDLLS QGTYLGPLHG IPYGLKDIVA VPGYKTTWGS TSFKDQFLDI
301: EAWVYKRLKA SGAVLVAKLV TGSMAYDDIW FGGRTRNPWN IEEFSTGSSA GPAASTSAGM VPFAIGSETA GSMTYPAARC GITALRPTFG SVGRTGVMSI
401: SESLDKLGPF CRTAADCAVI LDAIKGKDPD DLSSREIAFE DPFSVDITKL TVGYTKDADM KVVEVLGSKG VNMVPFELNY TVESVQGILN FTMDVDMLAH
501: FDEWQRTGQE DLYEAQDQWP VELRRARVVT AVDYIQAQRA RGKLIREVEK SFTVDAFIGN VTDWEKVCMG NLVGLPVLVI PTGFKNITDP PTNSCRRRTT
601: INAGIYAPPE RDHIALALGM AYQSVTDAHR KRPPIDDLGP DDSIPNPPRA LIPPRRLHI

Arabidopsis Description

Amidase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6N3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.