Factsheet for VIT_15s0024g01020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0024g00980.t01	Wine grape	cytosol	85.21	88.81
VIT_15s0024g01010.t01	Wine grape	endoplasmic reticulum, golgi	91.02	82.72
VIT_00s0283g00010.t01	Wine grape	mitochondrion	22.54	74.42
KRH41039	Soybean	mitochondrion	58.8	68.44
KRH59711	Soybean	plasma membrane	71.83	65.91
Solyc06g068690.2.1	Tomato	extracellular	67.08	65.46
Solyc03g118030.2.1	Tomato	plastid	69.19	62.98
PGSC0003DMT400036918	Potato	plastid	68.66	62.5
KXG28572	Sorghum	golgi	68.49	59.03
Zm00001d052660_P002	Maize	mitochondrion	67.78	58.6
CDX98979	Canola	plastid	66.73	58.4
Bra009269.1-P	Field mustard	plastid	66.2	58.11
CDX70030	Canola	plastid	66.2	58.11
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	64.96	57.93
TraesCS3B01G379500.5	Wheat	golgi, vacuole	64.96	57.93
AT5G07360.1	Thale cress	plastid	67.08	57.81
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	64.61	57.25
Os11t0536800-01	Rice	golgi, plastid	66.2	56.2
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	65.32	55.79
VIT_12s0028g01330.t01	Wine grape	mitochondrion	18.66	19.41
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	18.66	17.46
VIT_07s0031g02700.t01	Wine grape	golgi	18.13	16.89
VIT_14s0128g00320.t01	Wine grape	cytosol	12.68	16.63
VIT_12s0028g00300.t01	Wine grape	cytosol	14.44	13.51
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	13.73	13.22

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:100264385	wikigene:100264385	Gene3D:3.90.1300.10	MapMan:35.1	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_dom	ProteinID:CBI39989	ProteinID:CBI39989.3	UniProt:D7UB65	EMBL:FN596748
GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0016787	InterPro:IPR036928	EntrezGene:LOC100264385
wikigene:LOC100264385	PFAM:PF01425	PANTHER:PTHR11895	PANTHER:PTHR11895:SF73	SUPFAM:SSF75304	TIGR:TC71204
UniParc:UPI0001BE55A3	ArrayExpress:VIT_15s0024g01020	EnsemblPlantsGene:VIT_15s0024g01020	EnsemblPlants:VIT_15s0024g01020.t01	unigene:Vvi.17786	RefSeq:XP_002270130
RefSeq:XP_002270130.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr15:-:2073891..2077316

Molecular Weight (calculated)

62688.5 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.202

Length

568 amino acids

Sequence
(BLAST)

001: MVSSSEQDSG ENSPKNNGEC SEKINEVSPL KCAFAIFDAD FFNDAKIAEI EKGATELNIP ISRANRKLVA SVNGGLHDPS YLVFNPEWGN EQVQSKTKRF
101: SYPSLSGIQR PESEEDIAFM TVLELGVLIK TKQITSEELT RIFLHRLKRY NYVLEAVVTY TEELAYKQAK EADEMLARGI YLGPLHGIPY GLKDIISVPQ
201: YKTTWGSKTF KDQVLDIEAS VFKKLKSAGA VLVAKLATGS LAYGGIWFGG RTRNPWNIEE YPIGSSAAAA ASTSAGILNL HQLRNYFPAA SCGVTALRPT
301: FGAVGRTGVM SISESLDKIG PFCRSAVDCT IILDAILGKD PDDPSSKDIS LDDPFSVDIT NLTVGYLDDA EMEVIHILES KGVKMVPFKL NYTVNHVQGI
401: LNFAMDVDML AHFDEWQRSG EDDFYEAQDL WPVELRRARM IPAVDYVQAQ RARGKLIREI RESFTVDAFI GNATDWEKVC IGNLVAMPVV IVPTGFTKIS
501: NPPPDGSRRR STITTGIYAP PNHDHIALAL AMAYQSVTEH HRQRPPIDDL GPNDFIADSI STPDYLSS

Best Arabidopsis Sequence Match ( AT5G07360.2 )
(BLAST)

001: MARPSIATCD PSARPCLATR GSLPRSRTCA PLLFLCLLLG LTVFCADANP SDSKLLCSRL LPCEPSIEMV RNCKNLWKLL DRKVSVPCRK ITTLTRTVTL
101: TELPDKTMEA KCLQGMFELI DSAFFNETKL QEIAKGATEM NVPIYRANRK LVATKNGGLE NPSPLVFNPS WNREVQRVQD KRFKYPSASG VKLPRDEEDI
201: AFMSVLELGE LIKTRQITSK ELVRIYLKQL KRYNHVLEAV VTYTEELAYK QAKEADDLLS QGTYLGPLHG IPYGLKDIVA VPGYKTTWGS TSFKDQFLDI
301: EAWVYKRLKA SGAVLVAKLV TGSMAYDDIW FGGRTRNPWN IEEFSTGSSA GPAASTSAGS ETAGSMTYPA ARCGITALRP TFGSVGRTGV MSISESLDKL
401: GPFCRTAADC AVILDAIKGK DPDDLSSREI AFEDPFSVDI TKLTVGYTKD ADMKVVEVLG SKGVNMVPFE LNYTVESVQG ILNFTMDVDM LAHFDEWQRT
501: GQEDLYEAQD QWPVELRRAR VVTAVDYIQA QRARGKLIRE VEKSFTVDAF IGNVTDWEKV CMGNLVGLPV LVIPTGFKNI TDPPTNSCRR RTTINAGIYA
601: PPERDHIALA LGMAYQSVTD AHRKRPPIDD LGPDDSIPNP PRALIPPRRL HI

Arabidopsis Description

Amidase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6N3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.