Factsheet for VIT_14s0128g00320.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92836	Soybean	cytosol	72.06	72.06
KRH33958	Soybean	cytosol	71.13	71.13
AT1G08980.1	Thale cress	cytosol	64.9	66.12
Bra031652.1-P	Field mustard	cytosol	63.74	65.56
Solyc10g086170.1.1	Tomato	cytosol	64.43	65.49
CDY06342	Canola	cytosol	63.74	65.4
CDY22653	Canola	cytosol	63.74	65.4
PGSC0003DMT400093880	Potato	cytosol	65.13	65.28
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	60.28	62.44
CDY03602	Canola	cytosol, plastid	43.88	62.09
EER97555	Sorghum	cytosol	60.28	59.73
Os04t0118100-01	Rice	cytosol	59.35	59.08
TraesCS2D01G573300.1	Wheat	cytosol	60.97	58.8
Zm00001d006886_P002	Maize	cytosol	59.82	58.33
TraesCS2A01G562400.1	Wheat	cytosol	60.97	57.89
TraesCS2B01G624200.1	Wheat	cytosol	59.35	57.11
HORVU6Hr1G060680.1	Barley	cytosol	20.79	56.6
Os04t0117900-01	Rice	plasma membrane, plastid	56.12	55.99
TraesCS2B01G603900.1	Wheat	cytosol	56.12	54.98
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	53.81	53.81
TraesCS5D01G083700.1	Wheat	cytosol	36.95	53.16
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	54.27	39.83
VIT_12s0028g00300.t01	Wine grape	cytosol	51.04	36.41
VIT_12s0028g01330.t01	Wine grape	mitochondrion	22.63	17.95
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	23.79	16.97
VIT_07s0031g02700.t01	Wine grape	golgi	23.56	16.72
VIT_15s0024g00980.t01	Wine grape	cytosol	18.71	14.86
VIT_00s0283g00010.t01	Wine grape	mitochondrion	5.77	14.53
VIT_15s0024g01010.t01	Wine grape	endoplasmic reticulum, golgi	18.71	12.96
VIT_15s0024g01020.t01	Wine grape	cytosol	16.63	12.68

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:100240917	wikigene:100240917	MapMan:11.2.1.2.1	Gene3D:3.90.1300.10	EMBL:AM463419
InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	ProteinID:CAN77023	ProteinID:CAN77023.1
ProteinID:CBI36757	ProteinID:CBI36757.3	UniProt:D7U1Z1	EMBL:FN596501	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0016787	InterPro:IPR036928	EntrezGene:LOC100240917	wikigene:LOC100240917	PFAM:PF01425
ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	SUPFAM:SSF75304	TIGR:TC57025	UniParc:UPI00015C9C09
ArrayExpress:VIT_14s0128g00320	EnsemblPlantsGene:VIT_14s0128g00320	EnsemblPlants:VIT_14s0128g00320.t01	unigene:Vvi.12518	RefSeq:XP_002284823	RefSeq:XP_002284823.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:+:2963279..2966189

Molecular Weight (calculated)

46708.0 Da

IEP (calculated)

5.432

GRAVY (calculated)

-0.002

Length

433 amino acids

Sequence
(BLAST)

001: MAKASNYGAF MERFILQPSS SSHELPLNGL TFAVKDIFDV DGYVTGFGNP DWARTHQAAM LTAPSVLAVL KGGATCVGKT VMDEMAYSIN GENKHYGTPT
101: NPQAPDRVPG GSSSGSAVAV GAMLVDFSLG TDTGGSVRVP ASYCGIFGIR PSHGVVSTTG VIPMAQSFDT VGWFARDPEI LNRVGHVLLP FPDVNPVKPS
201: QIIIPEDCFR LLSIPIDRVT QVLIKSVEKL FGSDIVKHVS LGDYVEDKVT SLKPFMSKEN QTQEYNIPSL AALSTAMRLL QRYEFKNNHG EWVREVQPDL
301: GPGIRERVWE ALGTTDEKID VCQSLKTEFR SALTDLLGDS GVLVLPTVPG PPPKLQTDPT TLESFRARAF SLLSIAGVSG FCQVSIPLGL YDNLPVAVSL
401: LAKHGSDGFL LNLVQTLYGS IKEQVEVAEK TSY

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.