CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92836	Soybean	cytosol	95.38	95.38
VIT_14s0128g00320.t01	Wine grape	cytosol	71.13	71.13
AT1G08980.1	Thale cress	cytosol	65.59	66.82
Bra031652.1-P	Field mustard	cytosol	63.05	64.85
CDY06342	Canola	cytosol	63.05	64.69
CDY22653	Canola	cytosol	62.82	64.45
PGSC0003DMT400093880	Potato	cytosol	61.89	62.04
Solyc10g086170.1.1	Tomato	cytosol	60.51	61.5
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	58.89	61.0
CDY03602	Canola	cytosol, plastid	42.73	60.46
Os04t0118100-01	Rice	cytosol	58.43	58.16
EER97555	Sorghum	cytosol	58.2	57.67
TraesCS2D01G573300.1	Wheat	cytosol	57.97	55.9
Zm00001d006886_P002	Maize	cytosol	57.27	55.86
Os04t0117900-01	Rice	plasma membrane, plastid	55.66	55.53
TraesCS2B01G624200.1	Wheat	cytosol	56.58	54.44
TraesCS2A01G562400.1	Wheat	cytosol	56.81	53.95
TraesCS2B01G603900.1	Wheat	cytosol	53.58	52.49
HORVU6Hr1G060680.1	Barley	cytosol	19.17	52.2
TraesCS5D01G083700.1	Wheat	cytosol	35.8	51.49
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	50.58	50.58
KRH58264	Soybean	golgi, plasma membrane	33.26	44.44
KRH41841	Soybean	endoplasmic reticulum	50.35	36.89
KRH60539	Soybean	extracellular	49.88	36.8
KRH43896	Soybean	cytosol, endoplasmic reticulum	50.81	36.79
KRH10544	Soybean	golgi	50.35	36.45
KRH58262	Soybean	cytosol	14.78	23.02
KRG98874	Soybean	mitochondrion	19.86	18.11
KRH59629	Soybean	golgi	24.48	17.43
KRH10653	Soybean	cytosol	24.25	17.3
KRH21697	Soybean	cytosol	24.02	17.13
KRH40976	Soybean	golgi	24.02	17.08
KRH46093	Soybean	mitochondrion	20.79	16.57
KRH63971	Soybean	cytosol, golgi, peroxisome	22.63	15.81
KRH53966	Soybean	cytosol, golgi, peroxisome	22.4	15.62
KRH41039	Soybean	mitochondrion	14.78	13.11
KRH59711	Soybean	plasma membrane	17.78	12.44

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:100807674	MapMan:11.2.1.2.1	Gene3D:3.90.1300.10	EMBL:ACUP02006566	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	EnsemblPlantsGene:GLYMA_10G155400	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0016787	UniProt:I1LBD3	InterPro:IPR036928	EnsemblPlants:KRH33958	ProteinID:KRH33958
ProteinID:KRH33958.1	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	MetaCyc:PWY-5921
SUPFAM:SSF75304	UniParc:UPI000233CAC8	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:39005681..39009843

Molecular Weight (calculated)

46459.7 Da

IEP (calculated)

6.002

GRAVY (calculated)

0.044

Length

433 amino acids

Sequence
(BLAST)

001: METASDYGAF TEKFTLPPNS APALPLKSLT FAVKEIFDTE GYVTGFGNPD WARTHPVATS TAPTALALLR AGATCVGKTV MDEMAYSING ENIHYGTPRN
101: PCAPDRVPGG SSSGSAVAVG AKLVDFSLGT DTGGSVRVPA SYCGIFGFRP SHGAVSESGV IPMSQSFDTV GWFARDPMIL SRVGGVILQL PDVAPPIRPT
201: SIIIAEDCFQ LSSTPFDVVT GTVIKAVEKL YGGDVLKPEI LGDYVKTNVP SLKHFMSKDN TDQIYNIPSL AALSSAMRLL QRFEFKNNHG EWISAVKPDL
301: GPGISERVSD ALRTTGENID ICYSIKRELH DALSALLGDF GVLMIPTVPG PPPKLQTNTS DLEIFRARAF SLLSIAGVSG FCQVSIPLGM YNNLPLSISL
401: VARHGADKFL LHLVESLYDS IEDRKQHIIE HKL

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.