Factsheet for TraesCS2A01G562400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G624200.1	Wheat	cytosol	93.2	94.44
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	76.97	81.06
EER97555	Sorghum	cytosol	72.15	75.29
Os04t0118100-01	Rice	cytosol	71.71	75.17
HORVU2Hr1G126540.1	Barley	cytosol	55.26	74.12
Zm00001d006886_P002	Maize	cytosol	71.49	73.42
Os04t0117900-01	Rice	plasma membrane, plastid	69.74	73.27
VIT_14s0128g00320.t01	Wine grape	cytosol	57.89	60.97
CDY22653	Canola	cytosol	54.82	59.24
Bra031652.1-P	Field mustard	cytosol	54.61	59.14
CDY06342	Canola	cytosol	54.61	59.0
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	53.95	58.85
KRG92836	Soybean	cytosol	54.82	57.74
AT1G08980.1	Thale cress	cytosol	53.73	57.65
KRH33958	Soybean	cytosol	53.95	56.81
Solyc10g086170.1.1	Tomato	cytosol	52.19	55.87
CDY03602	Canola	cytosol, plastid	35.53	52.94
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	39.47	30.61
TraesCS6A01G318800.1	Wheat	plastid	40.57	30.38
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	22.37	18.85
TraesCS4A01G206800.1	Wheat	cytosol	21.49	16.2
TraesCS1A01G413700.1	Wheat	golgi	21.27	15.93
TraesCS2A01G041300.1	Wheat	golgi	20.61	15.26
TraesCS2A01G041400.1	Wheat	plastid	19.52	14.64
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	17.11	12.24
PGSC0003DMT400031298	Potato	cytosol	1.1	3.12

Protein Annotations

EnsemblPlants:TraesCS2A01G562400.1	EnsemblPlantsGene:TraesCS2A01G562400	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	PFAM:PF01425	ScanProsite:PS00571	SEG:seg
SUPFAM:SSF75304	MapMan:11.2.1.2.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:763453057..763454992

Molecular Weight (calculated)

47513.5 Da

IEP (calculated)

4.714

GRAVY (calculated)

0.132

Length

456 amino acids

Sequence
(BLAST)

001: MEDGRAMEEA NGDDHGAFME KFILPPPPSS DHQQQQLPLH GLTFAIKDIF DVAGRVTGFG TPDWARTHAP AAATAPAVLA ALAAGATGVG KTVMDEMAYS
101: INGENAHYGT PANPCAPGRV PGGSSSGSAV AVAASLADFA LGTDTGGSVR VPAAYCGIFG LRPSHGVVSA ENVVPMAQMF DTVGWFARDL PTLFRVTDVM
201: LPPMPAATDV DAEIRRRPSR VIIPADCFKI LGSVDDHTYE ILNASAAKIF GSDAVVDNGN LGDFVSSNVP SIGKFMTDLS AVEASSSCVP PLSAISRVMR
301: VLQRSEFKAN HAEWVNMVKP NLGPGIRERV QEAIASEDES AMDDLHAVRT EFKSALATLL KDDGILAIPT VPGAPPKLCL DAALLEDFRA RAFSLLSIAG
401: LSGFCQISIP LGTRNGVPVS VSLLAGHGGD CFLVAVAQEL HEALQAEAAA AWGSSA

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.