Factsheet for TraesCS4A01G270900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	97.79	97.79
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	94.22	94.54
Os03t0707900-01	Rice	plasma membrane	86.39	86.69
EER91017	Sorghum	endoplasmic reticulum, golgi	82.14	82.14
HORVU4Hr1G006870.1	Barley	plastid	89.46	80.67
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	81.97	80.07
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	51.02	67.87
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	61.39	60.98
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	60.88	60.68
CDY51926	Canola	endoplasmic reticulum	59.69	59.39
CDX75952	Canola	endoplasmic reticulum	59.18	58.98
Bra001692.1-P	Field mustard	endoplasmic reticulum	59.01	58.71
Solyc03g118690.2.1	Tomato	plastid	58.84	58.64
PGSC0003DMT400014757	Potato	endoplasmic reticulum	57.99	57.8
AT3G17970.1	Thale cress	endoplasmic reticulum	57.14	57.05
KRH60539	Soybean	extracellular	56.29	56.39
KRH41841	Soybean	endoplasmic reticulum	56.46	56.18
Bra018737.1-P	Field mustard	mitochondrion	57.31	56.07
CDX93679	Canola	mitochondrion	57.14	55.91
CDY40591	Canola	endoplasmic reticulum, golgi	55.95	54.83
CDX95800	Canola	endoplasmic reticulum	59.18	45.49
TraesCS6A01G318800.1	Wheat	plastid	45.92	44.34
CDX92180	Canola	endoplasmic reticulum	58.67	43.23
TraesCS2A01G562400.1	Wheat	cytosol	30.61	39.47
TraesCS1A01G413700.1	Wheat	golgi	18.88	18.23
TraesCS4A01G206800.1	Wheat	cytosol	18.54	18.02
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	15.82	17.19
TraesCS2A01G041300.1	Wheat	golgi	17.01	16.23
TraesCS2A01G041400.1	Wheat	plastid	16.33	15.79
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	12.76	11.77

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.1.2.4	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536
GO:GO:0009941	GO:GO:0016020	GO:GO:0016787	GO:GO:0031359	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:IPR036928	PFAM:PF01425	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895
PANTHER:PTHR11895:SF39	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	EnsemblPlantsGene:TraesCS4A01G270900	EnsemblPlants:TraesCS4A01G270900.1	SEG:seg	:

Description

No Description!

Coordinates

chr4A:+:581934950..581944657

Molecular Weight (calculated)

62724.2 Da

IEP (calculated)

8.515

GRAVY (calculated)

-0.063

Length

588 amino acids

Sequence
(BLAST)

001: MASSTAANLW VLLGLGIAGV LLAAKRLKRP ARPDHGAFVS LLELLPPPQP PPPQARXXXX XLSFAIADAF HVSGYITSFG SLEWAKTHDA ATQTSLVVST
101: LVDGGAICVG KTVIDEMAYS IHGENKHFGT PTNPAASDRV PGGCSSGSAV AVAGGMVDFA LGIDSIGGVR VPGGYCGVLA FRPSHAVISN SGVIPVAPSL
201: DTIGWFAKDP IVLRRVGHLL LKLSYTDIRL PRHFYIADDC FEISKIPARR LTQVVAKSVE KLYGRQVLSH VNLGNYLASK IPSLRNYSNG QKNGDSKFSS
301: LQALSSAMQL LHKHEFRDQH NEWINSAKSA VDASIVGNLS DDGDSTINIV QDARKEVRLA LNTLLKDDGI LVIPTALGCP PKLNARELSS TSYNAETLCL
401: QSLSSMSGCC QVTVPIGTHD KCPISVSFIA RHGGDRFLLD TTQAIYATIQ EQVEVLAKSN PSSKEAMSEE AAEAAKEKGN SAFKEKQWQK AINLYTEAIK
501: LNGKVATYYS NRAAAFLELA NYRQAETDCT SAIDIDPKIV KAYLRRGTAR EMLGYYKEAV DDFSHALVLE PMNKTAGAAI NRLKKLFP

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.