Factsheet for TraesCS4D01G040700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	97.79	97.79
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	95.24	95.56
Os03t0707900-01	Rice	plasma membrane	87.24	87.54
EER91017	Sorghum	endoplasmic reticulum, golgi	83.84	83.84
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	83.33	81.4
HORVU4Hr1G006870.1	Barley	plastid	89.8	80.98
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	52.21	69.46
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	62.24	61.82
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	61.9	61.69
CDY51926	Canola	endoplasmic reticulum	59.86	59.56
Solyc03g118690.2.1	Tomato	plastid	59.69	59.49
Bra001692.1-P	Field mustard	endoplasmic reticulum	59.52	59.22
CDX75952	Canola	endoplasmic reticulum	59.35	59.15
PGSC0003DMT400014757	Potato	endoplasmic reticulum	58.67	58.47
AT3G17970.1	Thale cress	endoplasmic reticulum	58.16	58.06
KRH60539	Soybean	extracellular	56.97	57.07
KRH41841	Soybean	endoplasmic reticulum	57.14	56.85
Bra018737.1-P	Field mustard	mitochondrion	57.65	56.41
CDX93679	Canola	mitochondrion	57.48	56.24
CDY40591	Canola	endoplasmic reticulum, golgi	56.29	55.17
CDX95800	Canola	endoplasmic reticulum	59.86	46.01
TraesCS6D01G298000.1	Wheat	plastid	45.75	44.17
CDX92180	Canola	endoplasmic reticulum	59.35	43.73
TraesCS2D01G573300.1	Wheat	cytosol	30.95	40.53
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	27.89	37.88
TraesCS5D01G083700.1	Wheat	cytosol	18.54	36.21
TraesCS1D01G421100.1	Wheat	golgi	19.22	18.52
TraesCS4D01G108100.1	Wheat	cytosol	18.54	18.02
TraesCS2D01G521500.1	Wheat	plastid	15.99	17.38
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	17.52	16.43
TraesCS2D01G040000.1	Wheat	cytosol	15.99	15.77
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	16.5	15.75
TraesCS2D01G039900.1	Wheat	mitochondrion	15.65	15.16
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	13.1	12.01

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.1.2.4	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536
GO:GO:0009941	GO:GO:0016020	GO:GO:0016787	GO:GO:0031359	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:IPR036928	PFAM:PF01425	PFAM:PF13432	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR11895	PANTHER:PTHR11895:SF39	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	EnsemblPlantsGene:TraesCS4D01G040700	EnsemblPlants:TraesCS4D01G040700.1	SEG:seg

Description

No Description!

Coordinates

chr4D:-:19177852..19188138

Molecular Weight (calculated)

63466.0 Da

IEP (calculated)

8.457

GRAVY (calculated)

-0.086

Length

588 amino acids

Sequence
(BLAST)

001: MASSTAANLW VLLGLGIAGV LLAAKRLKRP ARPDHGAFVS RLELLPPPQP PPPQARHPLT DLCFAIADAF HVSGYITSFG SLEWAKTHDA ATQTSLVVST
101: LVDGGAICVG KTVIDEMAYS IHGENKHFGT PTNPAASDRV PGGCSSGSAV AVAGGMVDFA LGIDSIGGVR VPGGYCGVLA FRPSHAVISN SGVIPVAPSL
201: DTIGWFAKDP IVLRRVGHLL LKLSYTDIRL PRHFYIADDC FEISKIPARR FTQVVTKSVE KLYGRQVLSH VNLGNYLASK IPSLRNYSNG QKNGDSKFSS
301: LQALSSAMQL LHKHEFRDQH NEWINSAKSA VDASIVGNLS DDGDSTINIV QDARKEVRLA LNTLLKDDGI LVIPTALGCP PKLNARELSS TSYNAETLCL
401: QSLSSMSGCC QVTVPIGTHD KCPISVSFIA RHGGDRFLLD TTQAIYATIQ EQVEILAKSN PSSKEAMNEE AAEAAKEKGN SAFKEKQWQK AINLYTEAIK
501: LNGKVATYYS NRAAAFLELA NYRQAETDCT SAIDIDPKIV KAYLRRGTAR EMLGYYKDAV DDFSHALVLE PMNKTAGVAI NRLKKLFP

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.