CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51926	Canola	endoplasmic reticulum	94.75	94.59
AT3G17970.1	Thale cress	endoplasmic reticulum	86.95	87.1
CDX93679	Canola	mitochondrion	80.51	79.03
CDY40591	Canola	endoplasmic reticulum, golgi	79.49	78.17
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	70.34	70.34
CDX95800	Canola	endoplasmic reticulum	90.68	69.93
KRH41841	Soybean	endoplasmic reticulum	67.8	67.68
CDX92180	Canola	endoplasmic reticulum	91.53	67.67
Solyc03g118690.2.1	Tomato	plastid	67.29	67.29
KRH60539	Soybean	extracellular	66.78	67.12
PGSC0003DMT400014757	Potato	endoplasmic reticulum	66.61	66.61
Os03t0707900-01	Rice	plasma membrane	60.68	61.09
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	59.15	59.35
EER91017	Sorghum	endoplasmic reticulum, golgi	59.15	59.35
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	58.98	59.18
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	58.98	58.78
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	58.98	57.81
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	56.95	57.34
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	37.97	50.68
CDY21581	Canola	cytosol	51.53	50.41
CDX69906	Canola	cytosol, plastid	51.53	50.41
HORVU4Hr1G006870.1	Barley	plastid	53.73	48.62
CDY22653	Canola	cytosol	33.39	46.68
CDY06342	Canola	cytosol	33.22	46.45
CDY03602	Canola	cytosol, plastid	21.36	41.18
CDY46509	Canola	cytosol	6.1	19.89
CDY59872	Canola	plastid	14.92	16.36
CDY04173	Canola	plastid	14.92	16.36
CDY31318	Canola	cytosol	16.78	16.15
CDY46805	Canola	cytosol	16.27	15.71
CDX84527	Canola	cytosol	16.1	15.42
CDY58262	Canola	cytosol	15.76	15.1
CDX98979	Canola	plastid	13.22	12.02
CDX70030	Canola	plastid	12.88	11.75
CDX69905	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.1.2.4	Gene3D:3.90.1300.10	GO:A0A078CGQ1	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_dom	EnsemblPlants:CDX75952	ProteinID:CDX75952	ProteinID:CDX75952.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00123982001	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036928	PFAM:PF01425
PFAM:PF13181	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895	PANTHER:PTHR11895:SF39	MetaCyc:PWY-5921
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0004EDC55D	SEG:seg	:	:	:

Description

BnaC03g40350D

Coordinates

chrLK031805:+:2113523..2117023

Molecular Weight (calculated)

64069.8 Da

IEP (calculated)

8.875

GRAVY (calculated)

-0.163

Length

590 amino acids

Sequence
(BLAST)

001: MASHASNLWV LLGLGIAGIL LAAKKLKKTI REDFGAFIEK LLLLPPPPPA PPKAPHPLTG LSFAISDLFD VTGYVTGFGH PDWVGTHEPA SSTSPVVSTL
101: VEGGATCVGK TVVDELAFSI SGETKHYESP TNPAAHDRIP GGASSGAAVA VATSAVDFAL GIDTVGGVRV PAGYCGVLGF KSSHGAISNA GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL HLPFATPRNP RQIILADDYF QLQKIPVDRI TQVVIKSAEK LFGRQLLKHQ NLENYFESKV PSLKEFARTK AITSTKVPTS
301: RLLANVMQLF QRHEFLQNHG DWIKTVKQAI DPVISSQLSE TPELTNEEIE NLNAIRNQAR AAINSLLKDD GILVIPTVPT LPPKLGSKEI LSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPVSVSF IARHGGDRFL LDTVQTMYAS LQENSSVISD PKSSKKTISL GESAEMAKEK GNQAFKEKQW QKAIGLYSEA
501: IKLSDSNGTY YNNRAAAYLE IGSFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGVYKE AMDDFRHALV LEPNNKRASQ SAERLRKLFQ

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.