CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018737.1-P	Field mustard	mitochondrion	98.5	98.5
CDY40591	Canola	endoplasmic reticulum, golgi	94.34	94.5
CDX75952	Canola	endoplasmic reticulum	79.03	80.51
CDY51926	Canola	endoplasmic reticulum	79.03	80.37
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	67.22	68.47
KRH41841	Soybean	endoplasmic reticulum	66.72	67.85
KRH60539	Soybean	extracellular	65.72	67.29
Solyc03g118690.2.1	Tomato	plastid	65.06	66.27
PGSC0003DMT400014757	Potato	endoplasmic reticulum	64.73	65.93
CDX95800	Canola	endoplasmic reticulum	78.87	61.96
Os03t0707900-01	Rice	plasma membrane	58.9	60.41
CDX92180	Canola	endoplasmic reticulum	78.37	59.02
EER91017	Sorghum	endoplasmic reticulum, golgi	56.74	57.99
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	56.24	57.48
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	55.91	57.14
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	56.07	56.93
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	56.74	56.64
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	53.91	55.29
CDY21581	Canola	cytosol	49.08	48.92
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	35.61	48.42
CDX69906	Canola	cytosol, plastid	48.42	48.26
HORVU4Hr1G006870.1	Barley	plastid	51.75	47.7
CDY22653	Canola	cytosol	32.45	46.21
CDY06342	Canola	cytosol	32.11	45.73
CDY03602	Canola	cytosol, plastid	20.63	40.52
CDY46509	Canola	cytosol	6.49	21.55
CDY59872	Canola	plastid	16.14	18.03
CDY04173	Canola	plastid	15.97	17.84
CDY31318	Canola	cytosol	16.14	15.82
CDX84527	Canola	cytosol	15.81	15.42
CDY46805	Canola	cytosol	15.64	15.38
CDY58262	Canola	cytosol	15.31	14.94
CDX70030	Canola	plastid	13.48	12.52
CDX98979	Canola	plastid	13.31	12.33
CDX69905	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.1.2.4	Gene3D:3.90.1300.10	GO:A0A078DZ16	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_dom	EnsemblPlants:CDX93679	ProteinID:CDX93679	ProteinID:CDX93679.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00156367001
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036928	PFAM:PF01425	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR11895	PANTHER:PTHR11895:SF39	MetaCyc:PWY-5921	SMART:SM00028	SUPFAM:SSF48452
SUPFAM:SSF75304	TMHMM:TMhelix	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EED105
SEG:seg	:	:	:	:	:

Description

BnaA06g03690D

Coordinates

chrLK031876:+:1289407..1292462

Molecular Weight (calculated)

65492.0 Da

IEP (calculated)

9.413

GRAVY (calculated)

-0.152

Length

601 amino acids

Sequence
(BLAST)

001: MQPKRRHVLA SRASNLWVLL GLGIAGALLI TKKLKKRVRE DFGAFIEKLL LLPPPQPSPP KAPHPLTALS FAVSDLFDVK GYVSGFGHPE WIRTHEAAAS
101: TSPVVSVLVE GGATCVGKTV VGEFAFSISG ETKHYDTPTN PAAPARIPGG SCSGAAVAVA ANLVDFALGI DTVGGVRVPA GYCGVLGFRS SQGIVSNAGI
201: IPVSSSLDAV GWFARDPNTL RRVGHVILQL PFAAQRNPRQ IILADDYLQF SKVPVDRISQ VVIKSAEKLF GRQALKHENL EKYFEAKVPS LKEFCREKVN
301: GDDAKLTTSM LLANVMQLLQ RHEFLQNHGD WINTVNPSID PAVYSQLCKT PELTDEEIEN LNAVRNQMRV AIGSLLKDDG ILVIPTMPSV PPKLGSKETM
401: SEDYKNRSSS LLCVASISGC CQVTVPLGKH DKCPVSVSLI ARHGGDRFLL DTVQKMYASL QENSSLIVNP KSSSVNTISQ EESAEIAKVK GNQAFKEKQW
501: QKAIGMYSEA IKLNDKNGTY YSNRAAAYLE LGSYRQAEGD CTKALTLDKK NIKAYLRRGT AREMLGNFKE AIDDFSYALV LEPNNKRAAL SADRLRKVFL
601: Q

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.