Factsheet for Bra018737.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 4
endoplasmic reticulum 1
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93679	Canola	mitochondrion	98.5	98.5
CDY40591	Canola	endoplasmic reticulum, golgi	94.18	94.33
Bra001692.1-P	Field mustard	endoplasmic reticulum	79.2	80.54
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	67.22	68.47
KRH41841	Soybean	endoplasmic reticulum	66.56	67.68
KRH60539	Soybean	extracellular	65.56	67.12
Solyc03g118690.2.1	Tomato	plastid	65.22	66.44
PGSC0003DMT400014757	Potato	endoplasmic reticulum	64.89	66.1
Os03t0707900-01	Rice	plasma membrane	59.23	60.75
EER91017	Sorghum	endoplasmic reticulum, golgi	57.24	58.5
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	56.41	57.65
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	56.57	57.43
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	56.07	57.31
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	57.24	57.14
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	54.08	55.46
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	35.94	48.87
HORVU4Hr1G006870.1	Barley	plastid	51.91	47.85
Bra031652.1-P	Field mustard	cytosol	32.11	45.84
Bra009383.1-P	Field mustard	cytosol, plastid	48.59	31.64
Bra026512.1-P	Field mustard	cytosol	6.49	21.55
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	14.31	20.77
Bra031917.1-P	Field mustard	cytosol	16.14	15.82
Bra009269.1-P	Field mustard	plastid	13.48	12.52
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.1.2.4	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	EnsemblPlantsGene:Bra018737	EnsemblPlants:Bra018737.1	EnsemblPlants:Bra018737.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036928	UniProt:M4DQE4
PFAM:PF00515	PFAM:PF01425	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895	PANTHER:PTHR11895:SF39
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000253ECDC	SEG:seg	:	:

Description

AT3G17970 (E=3e-258) atToc64-III | atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III); binding / carbon-nitrogen ligase, with glutamine as amido-N-donor

Coordinates

chrA06:-:2251487..2254418

Molecular Weight (calculated)

65454.9 Da

IEP (calculated)

9.413

GRAVY (calculated)

-0.161

Length

601 amino acids

Sequence
(BLAST)

001: MQPKRRHVLA SRASNLWVLL GLGIAGALLI TKKLKKRVRE DFGAFIEKLL LLPPPQPSPP KAPHPLTALS FAVSDLFDVK GYVSGFGHPE WIRTHEAAAS
101: TSPVVSVLVE GGATCVGKTV VGEFAFSISG ETKHYDTPTN PAAPARIPGG SCSGAAVAVA ANLVDFALGI DTVGGVRVPA GYCGVLGFRS SQGIVSNAGI
201: IPVSSSLDAV GWFARDPNTL RRVGHVILQL PFAAQRNPRQ IILADDYLHL SKVPVDRISQ VVIKSAEKLF GRQALKHENL EKYFEAKVPS LKEFCRGKAN
301: GDDAKLTTSM LLANVMQLLQ RHEFLQNHGD WINTVNPSID PAVYSQLCKT PELTDEEIEN LNAVRNQMRV AIGSLLKDDG ILVIPTMPSV PPKLGSKETM
401: SEDYKNRSSS LLCVASISGC CQVTVPLGKH DKCPVSVSLI ARHGGDRFLL DTVQKMYASL QENSSLIINP KSSSINTISQ EESAEIAKEK GNQAFKEKQW
501: QKAIGMYSEA IKLNDKNGTY YSNRAAAYLE LGSYRQAEAD CTKALTLDKK NIKAYLRRGT AREMLGNFKE AIDDFSYSLV LEPNNKRAAL SADRLRKVFL
601: Q

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.