Factsheet for Bra001692.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51926	Canola	endoplasmic reticulum	96.45	96.45
AT3G17970.1	Thale cress	endoplasmic reticulum	85.79	86.08
Bra018737.1-P	Field mustard	mitochondrion	80.54	79.2
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	69.37	69.49
KRH41841	Soybean	endoplasmic reticulum	67.17	67.17
Solyc03g118690.2.1	Tomato	plastid	66.33	66.44
KRH60539	Soybean	extracellular	65.99	66.44
PGSC0003DMT400014757	Potato	endoplasmic reticulum	65.48	65.59
Os03t0707900-01	Rice	plasma membrane	59.73	60.24
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	59.22	59.52
EER91017	Sorghum	endoplasmic reticulum, golgi	58.88	59.18
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	58.71	59.01
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	58.71	58.61
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	58.88	57.81
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	56.68	57.17
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	37.9	50.68
HORVU4Hr1G006870.1	Barley	plastid	53.98	48.93
Bra031652.1-P	Field mustard	cytosol	32.66	45.84
Bra009383.1-P	Field mustard	cytosol, plastid	51.27	32.83
Bra026512.1-P	Field mustard	cytosol	5.58	18.23
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	12.69	18.12
Bra031917.1-P	Field mustard	cytosol	16.24	15.66
Bra009269.1-P	Field mustard	plastid	12.69	11.59
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.1.2.4	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	EnsemblPlantsGene:Bra001692	EnsemblPlants:Bra001692.1	EnsemblPlants:Bra001692.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0031359	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036928
UniProt:M4CBW2	PFAM:PF01425	PFAM:PF13181	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895
PANTHER:PTHR11895:SF39	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002540469	SEG:seg	:	:

Description

AT3G17970 (E=7e-267) atToc64-III | atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III); binding / carbon-nitrogen ligase, with glutamine as amido-N-donor

Coordinates

chrA03:+:17880585..17884068

Molecular Weight (calculated)

64387.4 Da

IEP (calculated)

8.664

GRAVY (calculated)

-0.140

Length

591 amino acids

Sequence
(BLAST)

001: MASSHASNLW VLLGLGIAGI LLAAKKLKKT IRQDLGAFID KLLLLPPPPP PPPKAPHPLT ALSFAISDLF DVSGYVTGFG HPDWVRTHEP AASTCPVVST
101: LVEGGATCVG KTVVDELAFS ISGETKHYES PTNPAAHDRI PGGACSGAAI SVATSAVDFA LGIDTVGGVR VPAGYCGVLG FKSSHGAISN AGIIPVSSSL
201: DSVGWFARDP NTLRRVGHVL LHLPFATPRN PRQIILADDY FQLLKIPVDR ITQVVIKSAE KLFGKQLLKH LNLENYFESK VPSLKEFART KAITSTKVPT
301: SRLLANVMQL LQRHEFLQNH GDWINTVKPA IDPVISSQLS ETPEITNEEI ENLNAIRNQT RAAINTLLKD DGILVIPTMP TLPPKLGSKE IISEDYQNRA
401: YSLLSIASIS GCCQVTVPLG YHEKCPVSVS FIARHGGDRF LLDTVQTMYA SLQENSSIIA DPKSSKKTIS QEESAEIAKE KGNQAFKEKQ WQKAIGLYSE
501: AIKLSDSNGT YYNNRAAAYL EIGSFLQAEE DCTKAITLDK KNVKAYLRRG TAREMLGVYK EAMDDFRHAL VLEPNNKRAS QSAERLRKLF Q

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.