Factsheet for Bra026512.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46509	Canola	cytosol	100.0	100.0
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	80.11	35.02
HORVU5Hr1G093800.2	Barley	mitochondrion, plastid	55.8	27.45
AT3G25660.1	Thale cress	plastid	79.56	26.82
KRG98874	Soybean	mitochondrion	69.61	26.53
Solyc10g007840.2.1	Tomato	plastid	71.82	24.57
VIT_12s0028g01330.t01	Wine grape	mitochondrion	71.27	23.63
KRH46093	Soybean	mitochondrion	70.17	23.39
TraesCS2D01G521500.1	Wheat	plastid	64.09	21.44
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	64.09	21.44
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	64.09	21.44
EES11532	Sorghum	plastid	63.54	21.26
Os04t0643200-00	Rice	plastid	62.43	21.16
GSMUA_Achr9P09040_001	Banana	plastid	66.3	20.73
Zm00001d002104_P001	Maize	mitochondrion, plastid	62.43	20.7
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	28.18	14.7
Bra031652.1-P	Field mustard	cytosol	19.89	8.55
Bra031917.1-P	Field mustard	cytosol	22.65	6.69
Bra018737.1-P	Field mustard	mitochondrion	21.55	6.49
Bra001692.1-P	Field mustard	endoplasmic reticulum	18.23	5.58
Bra009269.1-P	Field mustard	plastid	18.23	5.1
Bra009383.1-P	Field mustard	cytosol, plastid	22.1	4.33
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Bra026512.1	EnsemblPlants:Bra026512.1-P	EnsemblPlantsGene:Bra026512	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	ncoils:Coil	PANTHER:PTHR11895	PANTHER:PTHR11895:SF141	PFAM:PF01425	SEG:seg
SUPFAM:SSF75304	UniParc:UPI00025464D5	UniProt:M4ECK2	MapMan:35.1	:	:

Description

AT3G25660 (E=4e-014) | glutamyl-tRNA(Gln) amidotransferase, putative

Coordinates

chrA02:+:19781932..19782934

Molecular Weight (calculated)

19377.1 Da

IEP (calculated)

5.572

GRAVY (calculated)

0.155

Length

181 amino acids

Sequence
(BLAST)

001: MDVVGKKNMD EFGMGRTNEA SAFQVTANQW DLTRVLGGSS GSSAAAIEER LCIVSPGLDL WLNASSLDVI GCFVSTVADA DMLLHAISGF ESKSSTHEAA
101: SHFEALGCVL TEVSLPFFSL GVPAFYVLAS SESSSNLSRY DGVRTLIRKD YKAALDHNDI LISPAAPSAA YKILVKRKMI H

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.