Factsheet for Bra009269.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70030	Canola	plastid	100.0	100.0
AT5G07360.1	Thale cress	plastid	89.95	88.32
VIT_15s0024g00980.t01	Wine grape	cytosol	61.51	73.03
VIT_00s0283g00010.t01	Wine grape	mitochondrion	19.17	72.09
Solyc06g068690.2.1	Tomato	extracellular	60.74	67.53
KRH41039	Soybean	mitochondrion	50.54	67.01
VIT_15s0024g01020.t01	Wine grape	cytosol	58.11	66.2
KRH59711	Soybean	plasma membrane	62.91	65.75
VIT_15s0024g01010.t01	Wine grape	endoplasmic reticulum, golgi	63.37	65.6
PGSC0003DMT400036918	Potato	plastid	60.9	63.14
Solyc03g118030.2.1	Tomato	plastid	60.12	62.34
TraesCS3B01G379500.5	Wheat	golgi, vacuole	60.59	61.54
TraesCS3A01G347600.4	Wheat	endoplasmic reticulum, golgi	60.28	61.22
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	60.28	60.84
Zm00001d052660_P002	Maize	mitochondrion	61.67	60.73
KXG28572	Sorghum	golgi	61.82	60.7
Os11t0536800-01	Rice	golgi, plastid	61.98	59.94
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	60.28	58.65
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	12.98	20.29
Bra026512.1-P	Field mustard	cytosol	5.1	18.23
Bra031917.1-P	Field mustard	cytosol	16.69	17.62
Bra031652.1-P	Field mustard	cytosol	11.44	17.58
Bra018737.1-P	Field mustard	mitochondrion	12.52	13.48
Bra001692.1-P	Field mustard	endoplasmic reticulum	11.59	12.69
Bra009383.1-P	Field mustard	cytosol, plastid	14.68	10.29
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Bra009269.1	EnsemblPlants:Bra009269.1-P	EnsemblPlantsGene:Bra009269	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF73	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF75304	UniParc:UPI0002543792	UniProt:M4CYH2	MapMan:35.1	:	:

Description

AT5G07360 (E=1e-308) | amidase family protein

Coordinates

chrA10:+:15898157..15901141

Molecular Weight (calculated)

71703.3 Da

IEP (calculated)

7.991

GRAVY (calculated)

-0.209

Length

647 amino acids

Sequence
(BLAST)

001: MVAPPITTCD PTIRPCLLTR GPLPRTRTCA PLLLLLGLTV SLTVANPSCE SSVSMVRNCK QLWKILDRKV SVPRRRITTS PSNITQTELP DKTMEAKCLQ
101: SMFELIDSGF FNETKIQEIA NGATEMNLPI YRTNRKLVAT NNGGLENPSP LVFNASWNRE VPRAQAKRFN YPSISRVRLP RDEEDIAFMS VLELGELIKT
201: KQVTSKELVR IYLTRLKRYN HVLESVVTYT EELAYKQAKE ADDLLSQGTY LGPLHGIPYG LKDIIAVPGY KTTWGSTSFK DQILDIEAWV YKRLKASGAV
301: LVAKLVTGSL AYDDIWFGGR TRNPWNIEEF STGSSAGPAA STSAGMVPFA IGSETAGSMT YPAARCGVTA FRPTFGSVGR TGVMSLSESL DKLGPFCRTA
401: ADCAVVLDAI KGKDPEDLSS REIAFEDPFS VDITKLTVGY TKDADMKVVE VLGSKGVNMV PFELNYTVDS VQGILNFTMN VDMLAHFDEW QRTGQEDLYE
501: AQDQWPVELR RARVVTAVDY IQAQRARGKL IREVEKSFTV DAFIGNVTDW EKVCMGNLVG LPVLVIPTCF KNISEPPTKS CRRRTTINAG IYAPPERDHI
601: ALALGMAYQS VTDAHKKRPP IDDLGPDDSI PNPPRAIIPP RRLHIHE

Best Arabidopsis Sequence Match ( AT5G07360.3 )
(BLAST)

001: MARPSIATCD PSARPCLATR GSLPRSRTCA PLLFLCLLLG LTVFCADANP SDSKLLCSRL LPCEPSIEMV RNCKNLWKLL DRKVSVPCRK ITTLTRTVTL
101: TELPDKTMEA KCLQGMFELI DSAFFNETKL QEIAKGATEM NVPIYRANRK LVATKNGGLE NPSPLVFNPS WNREVQRVQD KRFKYPSASG VKLPRDEEDI
201: AFMSVLELGE LIKTRQITSK ELVRIYLKQL KRYNHVLEAV VTYTEELAYK QAKEADDLLS QGTYLGPLHG IPYGLKDIVA VPGYKTTWGS TSFKDQFLDI
301: EAWVYKRLKA SGAVLVAKLV TGSMAYDDIW FGGRTRNPWN IEEFSTGSSA GPAASTSAGM VPFAIGSETA GSMTYPAARC GITALRPTFG SVGRTGVMSI
401: SESLDKLGPF CRTAADCAVI LDAIKGKDPD DLSSREIAFE DPFSVDITKL TVGYTKDADM KVVEVLGSKG VNMVPFELNY TVESVQGILN FTMDVDMLAH
501: FDEWQRTGQE DLYEAQDQWP VELRRARVVT AVDYIQAQRA RGKLIREVEK SFTVDAFIGN VTDWEKVCMG NLVGLPVLVI PTGFKNITDP PTNSCRRRTT
601: INAGIYAPPE RDHIALALGM AYQSVTDAHR KRPPIDDLGP DDSIPNPPRA LIPPRRLHI

Arabidopsis Description

Amidase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6N3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.