Factsheet for Bra009383.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007087.1-P
Bra014801.1-P
Bra035826.1-P
Bra038249.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G09420.1	Bra035826.1-P	AT3G20000.1	17981999
AT5G09420.1	Bra038249.1-P	AT3G20000.1	17981999
AT5G09420.1	Bra007087.1-P	AT3G54660.1	17981999
AT5G09420.1	Bra014801.1-P	AT3G54660.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21581	Canola	cytosol	62.51	95.69
AT5G09420.1	Thale cress	cytosol	56.01	85.74
VIT_12s0028g00300.t01	Wine grape	cytosol	43.99	66.89
KRH58262	Soybean	cytosol	19.61	65.11
KRH58264	Soybean	golgi, plasma membrane	22.43	63.89
Solyc10g047300.1.1	Tomato	plastid	41.06	63.38
KRH10544	Soybean	golgi	41.06	63.38
KRH43896	Soybean	cytosol, endoplasmic reticulum	40.95	63.21
PGSC0003DMT400042984	Potato	extracellular, plasma membrane	22.43	62.16
GSMUA_Achr9P14860_001	Banana	mitochondrion	39.76	58.91
TraesCS6B01G349000.1	Wheat	plastid	37.92	57.47
TraesCS6A01G318800.1	Wheat	plastid	37.7	57.14
TraesCS6D01G298000.1	Wheat	plastid	37.59	56.98
KXG30729	Sorghum	plastid	36.73	55.21
Zm00001d018098_P005	Maize	plasma membrane	36.29	54.56
Os02t0754500-01	Rice	cytosol, mitochondrion, plastid	35.1	52.85
HORVU6Hr1G078210.1	Barley	mitochondrion	31.2	51.61
Bra001692.1-P	Field mustard	endoplasmic reticulum	32.83	51.27
Bra018737.1-P	Field mustard	mitochondrion	31.64	48.59
Bra031652.1-P	Field mustard	cytosol	20.69	45.37
Bra026512.1-P	Field mustard	cytosol	4.33	22.1
Bra022265.1-P	Field mustard	cytosol, mitochondrion	3.79	21.21
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	8.99	20.05
Bra031917.1-P	Field mustard	cytosol	10.73	16.15
Bra009269.1-P	Field mustard	plastid	10.29	14.68

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.2.1.7	Gene3D:3.40.50.1820	Gene3D:3.90.1300.10	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	EnsemblPlantsGene:Bra009383	EnsemblPlants:Bra009383.1
EnsemblPlants:Bra009383.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488
GO:GO:0005515	GO:GO:0016787	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR029058
InterPro:IPR036928	UniProt:M4CYT6	PFAM:PF00515	PFAM:PF00561	PFAM:PF01425	PRINTS:PR00111
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895	PANTHER:PTHR11895:SF92	SMART:SM00028	SUPFAM:SSF48452
SUPFAM:SSF53474	SUPFAM:SSF75304	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat
UniParc:UPI000254766C	SEG:seg	:	:	:	:

Description

AT5G09420 (E=2e-282) ATTOC64-V, MTOM64 | ATTOC64-V (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V); amidase/ binding / carbon-nitrogen ligase, with glutamine as amido-N-donor

Coordinates

chrA10:+:16416160..16421068

Molecular Weight (calculated)

102555.0 Da

IEP (calculated)

9.072

GRAVY (calculated)

-0.158

Length

923 amino acids

Sequence
(BLAST)

001: MSKSLTFIQT NASNPKTWVV IGVTVAGIVI LAETRKRRIK ALREEHFGAF LDRFELLPFP PPPPPAAKQT LSGLTFSISD AFDIKDYITG FGSPHWKKTH
101: EAAEKTAVVV TTLLRNGATC VAKTVMDEMG FGITGENMHY GTPINPLMPS NVPGGCSSGS AVSVAAELVD FALGIDTTGG VRIPASFCGI LAFRPSQGTV
201: SSVGVLPNSQ SLETAGWFAR DPSVLCQVGH ALLNLSAVTH KRQRSLIFAD DLFELTDVPK QKSVHVVRKA IENLPGYQAP KHMNVGQYVA SNVPSLAEFC
301: EKPGKSEDSA STLKALASVM LSIQRHEFKT NHEEWSQTCK SFLGPRFSND VVAALKSRNE NIKSLYRVKT EMRATIQSLL KEDGILVIPT VADPPPKLNT
401: KNKNAMNEFL DRNYALASIA SMSGCCQVTV PLGKHGDSPI SVSFLAYYGG DKFLLDTILD VYASLQDQAD IAASLAPVTD SNGIEPSEVM KEKGNAAYKG
501: RQWNKAVSCY TEAIKLNGAN ATYFCNRAAA YLELGRFQQA EEDCTEAILI DKKNVKAYLR RGTARESLIR YKESAADFKH ALVLEPQNKT AKIAEKRLRK
601: LMKKIRTIQN KMVDYLRLLR CFSFTASRDW LFRQSFANAG LRSVTTNLSH TNSIASTTSM HCWIPKSPNR SKPNLLLVHG FGANAMWQYG EHLRSFTGRF
701: NVYVPDLLFF GLSSTSEPNR TESFQARCLM RLMEAHGVHT MNIVGISYGG FVGYSLAAQF PEKVEKLVLC CAGVCLEEKD MEDGLFKVPN LEEATEILIP
801: QTPEKLKELI RFSFVKPIRG VPSFFLWDFI DVMCTEFVEE KRDLIKSILK DRRLSDLPRI RQKTLIIWGE EDQIFPLELG YRLKRYIGEN AEMVVIKKAG
901: HAVNLEKSKE FLKHLKSFLI DSL

Best Arabidopsis Sequence Match ( AT5G09420.1 )
(BLAST)

001: MSNTLSLIQS NASNPKVWVV IGVTVAGIVI LAETRKRRIR ALREEDFGAF LDRFELLPFP PPPPPAAKQS LSGLTFSISD AFDVKDYITG FGCPQWKKTH
101: EAAEKTAVVV TTLLKNGATC VGKTIMDELG FGIIGENKHY GTPINPLMPD NVPGGCSSGS AVSVGAELVD FSLGIDTTGG VRVPAAFCGI LGFRPSQGTV
201: SSVGVLPNSQ SLETVGWFAS DPSVLCQVGH ALLNLSAVTH RRQRSLIFAD DLFELSDIPK QKSVQVVRKA IENLSGYKTP KHVNVGQYVA SNVPSLAEFC
301: EQSGKSQNSA STLRALSSVM LAIQRHEFKT NHEEWWQTCK SFLGPRFSND VVTALKSKNE SIKSLYRVKN EMRATIQSLL KEDGILVIPT VADPPPRLNT
401: KRNKSLNEFL DRTYALSCIA SMSGCCQVTI PLGEHGDRPI SVSLLTYYGG DKFLLDTTLD VYASLQDQAK LASNLAPVSD TNGNMEASEV MKEKGNAAYK
501: GKQWNKAVNF YTEAIKLNGA NATYYCNRAA AFLELCCFQQ AEQDCTKAML IDKKNVKAYL RRGTARESLV RYKEAAADFR HALVLEPQNK TAKVAEKRLR
601: KHI

Arabidopsis Description

OM64Outer envelope protein 64, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4KCL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.