Factsheet for Bra014801.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009383.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54660.1	Bra009383.1-P	AT5G09420.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76141	Canola	plastid	93.66	95.21
Bra007087.1-P	Field mustard	plastid	80.98	88.45
AT3G54660.1	Thale cress	plastid	80.0	87.08
VIT_07s0141g00390.t01	Wine grape	plastid	68.62	75.49
PGSC0003DMT400019491	Potato	cytosol, extracellular, plastid	66.99	74.1
Solyc09g065900.2.1	Tomato	plastid	66.99	73.97
KRH71329	Soybean	plastid	65.53	73.94
KRH32102	Soybean	plastid	65.37	73.76
TraesCS4B01G278900.1	Wheat	plastid	63.41	70.91
TraesCS4D01G277400.1	Wheat	golgi	63.41	70.65
Os03t0163300-01	Rice	plastid	63.58	70.45
TraesCS4A01G025200.1	Wheat	golgi	62.93	70.36
GSMUA_Achr3P29340_001	Banana	plastid	63.9	70.3
Zm00001d027769_P001	Maize	plastid	62.28	69.64
EER95455	Sorghum	plastid	62.11	69.45
HORVU4Hr1G073930.1	Barley	mitochondrion, plastid	62.6	65.25
Os10t0415300-02	Rice	plastid	58.54	64.98
OQU91783	Sorghum	plastid	54.63	63.28
KRH71332	Soybean	cytosol	12.68	62.9
GSMUA_Achr9P21540_001	Banana	cytosol	14.31	55.0
Bra015006.1-P	Field mustard	cytosol	39.84	50.41
Bra001931.1-P	Field mustard	cytosol	39.19	49.79
Bra012738.1-P	Field mustard	peroxisome	10.08	29.81
Bra033540.1-P	Field mustard	plastid	24.39	26.64
Bra018700.1-P	Field mustard	mitochondrion	20.81	25.25
Bra022204.1-P	Field mustard	mitochondrion	20.65	25.2
Bra001645.1-P	Field mustard	plastid	24.39	24.27

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	Gene3D:3.30.390.30	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra014801	EnsemblPlants:Bra014801.1
EnsemblPlants:Bra014801.1-P	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004362	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725
GO:GO:0045454	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	GO:GO:0098869	InterPro:Glut-diS_reduct
InterPro:IPR016156	InterPro:IPR036188	UniProt:M4DE82	PFAM:PF02852	PFAM:PF07992	PRINTS:PR00368
PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR43256	PANTHER:PTHR43256:SF4	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nucl-diS_OxRdtase_dimer
SUPFAM:SSF51905	SUPFAM:SSF55424	TIGRFAMs:TIGR01424	UniParc:UPI0002544EB6	SEG:seg	:

Description

AT3G54660 (E=5e-268) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase

Coordinates

chrA04:+:3240396..3243853

Molecular Weight (calculated)

67480.6 Da

IEP (calculated)

8.887

GRAVY (calculated)

-0.259

Length

615 amino acids

Sequence
(BLAST)

001: MATTPKLTTT ISSSPSLQTT LCRKLPISIH LPSSSLRPRL TLLSNHRYNP SRRAQNDYGT DSDLRYDFDL FTLGAGSGGV RASRFATSFG ASAAVCELPF
101: STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYTHEFEDSH GFGWKYDTDP SHDWTTLIAN KNAELQRLTG IYKNILNNAN VKLIEGRGKV IDPHTVDVDG
201: RIYTTRNILI AVGGRPFIPD IPGREFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLSSEVHVFI RQKKVLRGFD EDVRDFVGEQ MSLRGIEFHT
301: EESPEAIIKS GDGSFSLKTS KGTVDGFSHV MFATGRKPNT KNLGLENVGV KLAKNGAIEV DEYSRTSVPS IWAVGDVTDR INLTPVALME GGALAKTLFQ
401: NEPTKPDHRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDIDV FTSHFKPLKA TLSGLPDRVF MKLIVCANTD KVLGVHMCGE DSPEIIQGFG VAVKAGLTKA
501: DFDATVGVHP TAAEEFVTMR TPTRKIRKGS SEMGVPYFIS GERQVLRLKQ LQGSREGCKI RLDLHHWSFL TRRTISIKSQ RFYQWRCHKA HNHGAKLFDR
601: VTYSTCRPDS QESLY

Best Arabidopsis Sequence Match ( AT3G54660.1 )
(BLAST)

001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV

Arabidopsis Description

EMB2360At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.