Factsheet for GSMUA_Achr3P29340_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P14860_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54660.1	GSMUA_Achr9P14860_001	AT5G09420.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027769_P001	Maize	plastid	75.31	76.55
EER95455	Sorghum	plastid	75.13	76.36
Os03t0163300-01	Rice	plastid	75.13	75.68
KRH32102	Soybean	plastid	72.45	74.31
TraesCS4A01G025200.1	Wheat	golgi	72.99	74.18
TraesCS4D01G277400.1	Wheat	golgi	73.17	74.09
TraesCS4B01G278900.1	Wheat	plastid	72.81	74.0
VIT_07s0141g00390.t01	Wine grape	plastid	73.88	73.88
KRH71329	Soybean	plastid	71.91	73.76
PGSC0003DMT400019491	Potato	cytosol, extracellular, plastid	73.17	73.56
Solyc09g065900.2.1	Tomato	plastid	72.45	72.71
CDY69892	Canola	plastid	71.91	71.53
AT3G54660.1	Thale cress	plastid	72.27	71.5
CDX73461	Canola	plastid	71.74	71.48
Bra007087.1-P	Field mustard	plastid	71.91	71.4
Os10t0415300-02	Rice	plastid	68.69	69.31
HORVU4Hr1G073930.1	Barley	mitochondrion, plastid	72.63	68.81
OQU91783	Sorghum	plastid	64.94	68.36
CDX94793	Canola	endoplasmic reticulum	19.68	65.87
GSMUA_AchrUn_...	Banana	cytosol	10.91	65.59
CDY13217	Canola	plastid	70.48	65.45
KRH71332	Soybean	cytosol	14.49	65.32
CDX76141	Canola	plastid	69.41	64.13
Bra014801.1-P	Field mustard	plastid	70.3	63.9
GSMUA_Achr9P21540_001	Banana	cytosol	17.17	60.0
GSMUA_Achr1P10930_001	Banana	cytosol	46.69	53.48
GSMUA_AchrUn_...	Banana	cytosol	33.27	51.81
GSMUA_Achr1P18490_001	Banana	plastid	14.85	29.23
GSMUA_Achr3P12660_001	Banana	plastid	29.16	28.75
GSMUA_Achr11P...	Banana	mitochondrion	23.08	27.56
GSMUA_Achr2P02040_001	Banana	mitochondrion	22.72	27.14

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004362	GO:GO:0005488
GO:GO:0005507	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725	GO:GO:0045454
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr3G29340_001	EnsemblPlants:GSMUA_Achr3P29340_001
EnsemblPlants:GSMUA_Achr3T29340_001	InterPro:Glut-diS_reduct	InterPro:IPR016156	InterPro:IPR036188	UniProt:M0SIV0	PFAM:PF02852
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR43256	PANTHER:PTHR43256:SF4
InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424	TIGRFAMs:TIGR01424	UniParc:UPI000295140A
SEG:seg	:	:	:	:	:

Description

Glutathione reductase, chloroplastic (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr3G29340_001]

Coordinates

chr3:-:28539868..28546145

Molecular Weight (calculated)

60494.3 Da

IEP (calculated)

7.327

GRAVY (calculated)

-0.204

Length

559 amino acids

Sequence
(BLAST)

001: MAAAPSLRAP PLTLASTAAA LRTFSRTLVL QPQKPLFTSS RALRSPPLPR FPSNLPRRRL ATRASADGGN GAPDPRQFDF DLFTIGAGSG GVRASRFAAT
101: YGAKVAICEL PFSTISSESA GGVGGTCVLR GCVPKKLLVY SSKYSHEFEE SRGFGWTYEA DPMHDWSTLI ANKNAELQRL TGIYKNILQN SGVTLIEGRG
201: KIVDPHTVDV DGKHYTARHI LISVGGRPNL PDIPGIEHAI DSDAALDLPS KPEKIAIVGG GYIALEFAGI FNGLKSEVHV FIRQKKVLRG FDEEIRNFVS
301: EQMSLRGIEF HTEETPQAIL KSSDGLLSLR TNKETVDGFS HIMFATGRRP NTKNLGLEDV GVELAKNGAI LVDEYSQTSV DSIWAVGDAT DRLNLTPVAL
401: MEGGAFAKTV FGKEPTVPDY RAVPSAVFCQ PPIGQVGLTE EQAIQEYGDV DIYTANFRPL KATLSGLPDR DFMKLIVCAS TNKVLGVHMC GEDSPEIIQG
501: IAIAVKAGLT KADFDSTVGI HPTSAEEFVT MRSPTRKIRK DPSPAMEKNV DEVRPDRNK

Best Arabidopsis Sequence Match ( AT3G54660.1 )
(BLAST)

001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV

Arabidopsis Description

EMB2360At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.