Factsheet for Zm00001d027769_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018098_P005

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54660.1	Zm00001d018098_P005	AT5G09420.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95455	Sorghum	plastid	96.36	96.36
Os03t0163300-01	Rice	plastid	86.73	85.95
TraesCS4A01G025200.1	Wheat	golgi	83.82	83.82
TraesCS4D01G277400.1	Wheat	golgi	84.0	83.7
TraesCS4B01G278900.1	Wheat	plastid	83.64	83.64
HORVU4Hr1G073930.1	Barley	mitochondrion, plastid	84.0	78.31
GSMUA_Achr3P29340_001	Banana	plastid	76.55	75.31
KRH32102	Soybean	plastid	71.64	72.29
KRH71329	Soybean	plastid	70.91	71.56
Solyc09g065900.2.1	Tomato	plastid	72.0	71.1
VIT_07s0141g00390.t01	Wine grape	plastid	72.18	71.02
PGSC0003DMT400019491	Potato	cytosol, extracellular, plastid	71.45	70.68
CDY69892	Canola	plastid	70.73	69.22
AT3G54660.1	Thale cress	plastid	70.91	69.03
CDX73461	Canola	plastid	70.36	68.98
Bra007087.1-P	Field mustard	plastid	70.36	68.74
CDY13217	Canola	plastid	70.18	64.12
CDX94793	Canola	endoplasmic reticulum	19.09	62.87
Bra014801.1-P	Field mustard	plastid	69.64	62.28
CDX76141	Canola	plastid	68.36	62.15
KRH71332	Soybean	cytosol	13.64	60.48
GSMUA_Achr9P21540_001	Banana	cytosol	16.0	55.0
Zm00001d018454_P004	Maize	cytosol	48.91	50.85
Zm00001d009779_P002	Maize	plastid	28.0	26.32
Zm00001d009163_P001	Maize	mitochondrion	23.64	26.05
Zm00001d040721_P002	Maize	mitochondrion	23.64	25.84
Zm00001d009212_P004	Maize	extracellular	27.64	24.76

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	Gene3D:3.30.390.30	Gene3D:3.50.50.60	EntrezGene:541986	UniProt:A0A1D6JPH3
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004362	GO:GO:0005488	GO:GO:0005507	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016491	GO:GO:0016668	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	GO:GO:0098869	InterPro:Glut-diS_reduct	InterPro:IPR016156	InterPro:IPR036188
ProteinID:ONL93902.1	ProteinID:ONL93904.1	PFAM:PF02852	PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368
PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR43256	PANTHER:PTHR43256:SF4	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase
InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424	TIGRFAMs:TIGR01424	UniParc:UPI0002213E37	EnsemblPlantsGene:Zm00001d027769
EnsemblPlants:Zm00001d027769_P001	EnsemblPlants:Zm00001d027769_T001	SEG:seg	:	:	:

Description

glutathione reductase1Glutathione reductase chloroplastic

Coordinates

chr1:+:13177255..13183513

Molecular Weight (calculated)

59193.8 Da

IEP (calculated)

7.396

GRAVY (calculated)

-0.108

Length

550 amino acids

Sequence
(BLAST)

001: MAAHATLPFS CSSTLQTLTR TLSSRGAHQL RGGFLRLPSL AALPRLAHPC RRHVSASAAA APNGASVEGE YDYDLFTIGA GSGGVRASRF ASALYGSRVA
101: ICEMPFATIA SDELGGLGGT CVLRGCVPKK LLVYASKYSH EFEESRGFGW TYETDPKHDW STLIANKNTE LQRLVGIYRN ILNNAGVTLI EGRGKIVDPH
201: TVSVNGKLYT AKHILVSVGG RPSMPDIPGI EHVIDSDAAL DLPSKPEKIA IVGGGYIALE FAGIFNGLKS EVHVFIRQKK VLRGFDEEVR DFVAEQMSLR
301: GITFHTEQSP QAITKSNDGL LSLKTNKENF GGFSHVMFAT GRRPNSKNLG LEAVGVEMDK NGAIVVDEYS RTSVDSIWAV GDVTNRVNLT PVALMEGGAF
401: AKTVFGNEPT KPDYRAIPSA VFSQPPIGQV GLTEEQAIEE YGDVDVFVAN FRPLKATLSG LPDRVLMKIL VCATSNKVVG VHMCGDDAPE IIQGIAIAVK
501: AGLTKQDFDA TIGIHPTSAE EFVTMRSPTR KIRKSSTDQV ESKDEVVSKQ

Best Arabidopsis Sequence Match ( AT3G54660.1 )
(BLAST)

001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV

Arabidopsis Description

EMB2360At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.