Factsheet for Zm00001d009212_P004

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 6
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32441	Sorghum	plastid	86.48	94.65
Os01t0337900-01	Rice	plastid	82.25	90.02
Zm00001d009779_P002	Maize	plastid	78.83	82.73
PGSC0003DMT400069988	Potato	cytosol	22.15	80.47
GSMUA_Achr3P12660_001	Banana	plastid	73.62	79.72
CDY32221	Canola	plastid	70.68	79.05
CDY34436	Canola	plastid	70.36	78.83
VIT_05s0077g01210.t01	Wine grape	plastid	73.13	78.63
Bra033540.1-P	Field mustard	plastid	71.66	78.15
KRH11978	Soybean	endoplasmic reticulum, nucleus	71.01	77.17
AT4G16155.1	Thale cress	plastid	71.17	77.07
KRH02332	Soybean	endoplasmic reticulum, nucleus	71.5	77.02
Solyc05g053100.2.1	Tomato	nucleus	70.85	76.18
PGSC0003DMT400069799	Potato	mitochondrion, plastid	70.68	76.14
KRH37006	Soybean	cytosol	41.21	74.63
CDX82387	Canola	plastid	71.99	71.52
CDX75895	Canola	plastid	71.82	71.47
Bra001645.1-P	Field mustard	plastid	71.66	71.2
AT3G16950.2	Thale cress	plastid	71.82	70.79
KRH50756	Soybean	endoplasmic reticulum, nucleus	71.5	69.79
GSMUA_Achr1P18490_001	Banana	plastid	31.6	68.31
CDY09711	Canola	plasma membrane	37.78	61.21
Bra012738.1-P	Field mustard	peroxisome	20.52	60.58
CDX90541	Canola	extracellular, nucleus, peroxisome	20.36	60.1
Zm00001d009163_P001	Maize	mitochondrion	27.52	33.87
Zm00001d040721_P002	Maize	mitochondrion	27.69	33.8
Zm00001d027769_P001	Maize	plastid	24.76	27.64
Zm00001d018454_P004	Maize	cytosol	21.5	24.95
CDX93023	Canola	cytosol, mitochondrion	2.28	20.59

Protein Annotations

EntrezGene:100381818	Gene3D:3.30.390.30	Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A1D6FI70	ProteinID:AQK91496.1
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF02852
PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR22912
PANTHER:PTHR22912:SF196	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424
SignalP:SignalP-noTM	UniParc:UPI000843ECDD	EnsemblPlantsGene:Zm00001d009212	EnsemblPlants:Zm00001d009212_P004	EnsemblPlants:Zm00001d009212_T004	SEG:seg

Description

dihydrolipoyl dehydrogenases

Coordinates

chr8:-:43471863..43480271

Molecular Weight (calculated)

65954.7 Da

IEP (calculated)

8.361

GRAVY (calculated)

0.003

Length

614 amino acids

Sequence
(BLAST)

001: MHLTVMSLSA AVANGAAAYR YDTIQPVARL RFCGLRRKAH RLHSPRYSRH LVAARRSVVV AATAGNGAAA SGTFDYDLVI IGAGVGGHGA ALHAVEKGLK
101: TAIIEGDVVG GTCVNRGCVP SKALLAVSGR MRELQDEHHM KSLGLQVSSP GYDRQVVADH ANNLASKIRS NLTNSMKALG VDILTGIGTI VGKQKVRYGK
201: VGFPDNEITA RNIIIATGSV PFVPKGIEID GKTVFTSDHA LKLESVPEWI AIVGSGYIGL EFSDVYTALG SEVYEQSFKP SLLKYMLRES NRVSYFSEYS
301: SVIYHGNMIS CSVVKKRRAK HMYNVTFVEA LDQLMPGFDP EIAKLAQRIL ISPRKIDYHT GVFASKITPA KDGKPVLIEL IDAKTKEHKE TLEVDAALIA
401: TGRAPFTKGL GLENINVVTQ QGFVPVDERM QVMDATGNVV PNLYCIGDAN GKLMLAHAAS AQGISVVEQI SGRDNILNHL SIPAACFTHP EISMVGLTEP
501: QAREKADKEG FEISVVKTSF KANTKALAEN EGDGLAKMIY RPDTGEILGV HILGLHAADL IHEASNAIAL GTHVQDIKFA VHAHPTLSEV LDELFKAAKV
601: NTAGSHSMNE PVAV

Best Arabidopsis Sequence Match ( AT3G16950.1 )
(BLAST)

001: MQSAMALSFS QTSFTRPNHV LGSSGSVFST PRSLRFCGLR REAFGFSTSN QLAIRSNRIQ FLSRKSFQVS ASASSNGNGA PPKSFDYDLI IIGAGVGGHG
101: AALHAVEKGL KTAIIEGDVV GGTCVNRGCV PSKALLAVSG RMRELQNEHH MKSFGLQVSA AGYDRQGVAD HANNLATKIR NNLTNSMKAI GVDILTGFGS
201: VLGPQKVKYG KDNIITAKDI IIATGSVPFV PKGIEVDGKT VITSDHALKL ESVPEWIAIV GSGYIGLEFS DVYTALGSEV TFIEALDQLM PGFDPEISKL
301: AQRVLINPRK IDYHTGVFAS KITPARDGKP VLIELIDAKT KEPKDTLEVD AALIATGRAP FTNGLGLENV NVVTQRGFIP VDERMRVIDG KGTLVPNLYC
401: IGDANGKLML AHAASAQGIS VVEQVSGRDH VLNHLSIPAA CFTHPEISMV GLTEPQAKEK GEKEGFKVSV VKTSFKANTK ALAENEGEGI AKMIYRPDNG
501: EILGVHIFGL HAADLIHEAS NAIALGTRIQ DIKLAVHAHP TLSEVLDELF KAAKVESHAT TRTVSEKVVV

Arabidopsis Description

LPD1Dihydrolipoyl dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A8MS68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.