Factsheet for Zm00001d009779_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19070	Sorghum	plastid	90.26	93.95
Os05t0156700-01	Rice	plastid	36.41	91.42
TraesCS1D01G107400.1	Wheat	plastid	87.86	87.27
TraesCS1B01G124900.1	Wheat	plastid	87.86	87.27
TraesCS1A01G099500.2	Wheat	plastid	84.44	86.97
HORVU1Hr1G023060.8	Barley	plastid	85.98	86.28
PGSC0003DMT400069988	Potato	cytosol	22.91	79.29
CDY32221	Canola	plastid	74.36	79.23
CDY34436	Canola	plastid	74.19	79.2
VIT_05s0077g01210.t01	Wine grape	plastid	77.27	79.16
Zm00001d009212_P004	Maize	extracellular	82.73	78.83
GSMUA_Achr3P12660_001	Banana	plastid	76.24	78.66
Bra033540.1-P	Field mustard	plastid	75.21	78.15
KRH02332	Soybean	endoplasmic reticulum, nucleus	75.73	77.72
KRH11978	Soybean	endoplasmic reticulum, nucleus	74.53	77.17
AT4G16155.1	Thale cress	plastid	74.53	76.9
Solyc05g053100.2.1	Tomato	nucleus	74.02	75.83
PGSC0003DMT400069799	Potato	mitochondrion, plastid	73.85	75.79
KRH37006	Soybean	cytosol	43.25	74.63
CDX75895	Canola	plastid	76.24	72.29
CDX82387	Canola	plastid	76.24	72.17
Bra001645.1-P	Field mustard	plastid	76.07	72.01
AT3G16950.2	Thale cress	plastid	75.9	71.27
KRH50756	Soybean	endoplasmic reticulum, nucleus	75.9	70.59
GSMUA_Achr1P18490_001	Banana	plastid	33.33	68.66
CDY09711	Canola	plasma membrane	40.0	61.74
Bra012738.1-P	Field mustard	peroxisome	21.88	61.54
CDX90541	Canola	extracellular, nucleus, peroxisome	21.71	61.06
Zm00001d009163_P001	Maize	mitochondrion	29.4	34.47
Zm00001d040721_P002	Maize	mitochondrion	29.57	34.39
Zm00001d027769_P001	Maize	plastid	26.32	28.0
Zm00001d018454_P004	Maize	cytosol	22.91	25.33
CDX93023	Canola	cytosol, mitochondrion	2.39	20.59

Protein Annotations

KEGG:00010+1.8.1.4	KEGG:00020+1.8.1.4	KEGG:00260+1.8.1.4	KEGG:00280+1.8.1.4	KEGG:00620+1.8.1.4	KEGG:00640+1.8.1.4
EntrezGene:100383599	Gene3D:3.30.390.30	Gene3D:3.50.50.60	MapMan:5.1.2.2.3	UniProt:A0A1D6FLZ4	ProteinID:AQK92688.1
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004148	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725	GO:GO:0045454	GO:GO:0050660
GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	InterPro:Lipoamide_DH	PFAM:PF02852	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR22912	PANTHER:PTHR22912:SF196	InterPro:Pyr_OxRdtase_I_AS
InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424	TIGRFAMs:TIGR01350	UniParc:UPI0004DE85B0	EnsemblPlantsGene:Zm00001d009779
EnsemblPlants:Zm00001d009779_P002	EnsemblPlants:Zm00001d009779_T002	SEG:seg	:	:	:

Description

dihydrolipoyl dehydrogenases

Coordinates

chr8:+:80645808..80652772

Molecular Weight (calculated)

61950.9 Da

IEP (calculated)

7.874

GRAVY (calculated)

-0.004

Length

585 amino acids

Sequence
(BLAST)

001: MGSTAAVSVS ASAIASRGCA RSEAARRPGG IRVCGLRSEA LTCHSLRISQ APARLMVTRP PPPAAATNGA AAGSCGFDYD LVIIGAGVGG HGAALHAVEE
101: GLKTAIIEGD VVGGTCVNRG CVPSKALLAV SGRMRELHDE HHMKSLGLQV SSPGYDRQAV ADHANNLASK IRINLTNSMK ALGVDILTGV GTIVGKQKVR
201: YGKAGFPDKE ITARNIIIAT GSVPFVPKGI EIDGKTVFTS DHALKLESVP DWIAIVGSGY IGLEFSDVYT ALGSEVTFVE ALDQLMPGFD PEIAKLAQRV
301: LINPRKIDYH TGVFASKITP AKDGKPVLIE LIDAKTKEHK ETLEVDAALI ATGRAPFTKG LGLENINVVT QRGFVPVDER MRVMDAGGNV VPNLYCIGDA
401: NGKLMLAHAA SAQGISVVEQ ISGKDHILNH LSIPAACFTH PEISMVGLTE PQAREKADKE GFEVNVVKTS FKANTKALAE NEGDGIAKLI YRPDTGEILG
501: VHILGLHAAD LIHEASNAIA LGTRVQDIKF AVHAHPTLSE VLDELFKAAK LQPRERPDSK PRQPPQPLLK VLSFVTTLFS SPKRD

Best Arabidopsis Sequence Match ( AT3G16950.2 )
(BLAST)

001: MQSAMALSFS QTSFTRPNHV LGSSGSVFST PRSLRFCGLR REAFGFSTSN QLAIRSNRIQ FLSRKSFQVS ASASSNGNGA PPKSFDYDLI IIGAGVGGHG
101: AALHAVEKGL KTAIIEGDVV GGTCVNRGCV PSKALLAVSG RMRELQNEHH MKSFGLQVSA AGYDRQGVAD HANNLATKIR NNLTNSMKAI GVDILTGFGS
201: VLGPQKVKYG KDNIITAKDI IIATGSVPFV PKGIEVDGKT VITSDHALKL ESVPEWIAIV GSGYIGLEFS DVYTALGSEV TFIEALDQLM PGFDPEISKL
301: AQRVLINPRK IDYHTGVFAS KITPARDGKP VLIELIDAKT KEPKDTLEVD AALIATGRAP FTNGLGLENV NVVTQRGFIP VDERMRVIDG KGTLVPNLYC
401: IGDANGKLML AHAASAQGIS VVEQVSGRDH VLNHLSIPAA CFTHPEISMV GLTEPQAKEK GEKEGFKVSV VKTSFKANTK ALAENEGEGI AKMIYRPDNG
501: EILGVHIFGL HAADLIHEAS NAIALGTRIQ DIKLAVHAHP TLSEVLDELF KAAKVESHAT TRTGDAKIKL NTNQEDRKGR RRGGDDEKQP SVSKDLKDIS
601: TRPSSFFENI SVGVLSLLSL IFV

Arabidopsis Description

LPD1Dihydrolipoyl dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A8MS68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.