Factsheet for TraesCS1A01G099500.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G107400.1	Wheat	plastid	97.71	94.23
TraesCS1B01G124900.1	Wheat	plastid	97.36	93.89
HORVU1Hr1G023060.8	Barley	plastid	95.25	92.8
Os05t0156700-01	Rice	plastid	36.97	90.13
EES19070	Sorghum	plastid	85.74	86.65
Zm00001d009779_P002	Maize	plastid	86.97	84.44
CDY32221	Canola	plastid	76.23	78.87
CDY34436	Canola	plastid	75.88	78.65
VIT_05s0077g01210.t01	Wine grape	plastid	78.7	78.28
Bra033540.1-P	Field mustard	plastid	77.11	77.8
GSMUA_Achr3P12660_001	Banana	plastid	76.94	77.07
PGSC0003DMT400069988	Potato	cytosol	22.89	76.92
AT4G16155.1	Thale cress	plastid	76.76	76.9
KRH02332	Soybean	endoplasmic reticulum, nucleus	76.41	76.14
KRH11978	Soybean	endoplasmic reticulum, nucleus	75.7	76.11
PGSC0003DMT400069799	Potato	mitochondrion, plastid	75.35	75.09
Solyc05g053100.2.1	Tomato	nucleus	75.18	74.78
KRH37006	Soybean	cytosol	43.13	72.27
CDX75895	Canola	plastid	77.82	71.64
CDX82387	Canola	plastid	77.82	71.52
Bra001645.1-P	Field mustard	plastid	77.64	71.36
AT3G16950.2	Thale cress	plastid	77.11	70.31
KRH50756	Soybean	endoplasmic reticulum, nucleus	76.76	69.32
GSMUA_Achr1P18490_001	Banana	plastid	33.45	66.9
CDY09711	Canola	plasma membrane	40.67	60.95
Bra012738.1-P	Field mustard	peroxisome	22.18	60.58
CDX90541	Canola	extracellular, nucleus, peroxisome	22.01	60.1
TraesCS1A01G105600.1	Wheat	mitochondrion	30.63	34.66
TraesCS1A01G066400.1	Wheat	mitochondrion	29.93	33.8
TraesCS4A01G025200.1	Wheat	golgi	27.82	28.73
TraesCS6A01G383800.1	Wheat	cytosol	23.42	26.44
CDX93023	Canola	cytosol, mitochondrion	2.29	19.12

Protein Annotations

KEGG:00010+1.8.1.4	KEGG:00020+1.8.1.4	KEGG:00260+1.8.1.4	KEGG:00280+1.8.1.4	KEGG:00620+1.8.1.4	KEGG:00640+1.8.1.4
Gene3D:3.30.390.30	Gene3D:3.50.50.60	MapMan:5.1.2.2.3	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004148	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725
GO:GO:0045454	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	InterPro:Lipoamide_DH
PFAM:PF02852	PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076
PANTHER:PTHR22912	PANTHER:PTHR22912:SF196	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905
SUPFAM:SSF55424	TIGRFAMs:TIGR01350	EnsemblPlantsGene:TraesCS1A01G099500	EnsemblPlants:TraesCS1A01G099500.2	SEG:seg	:

Description

No Description!

Coordinates

chr1A:-:95855104..95860805

Molecular Weight (calculated)

59663.6 Da

IEP (calculated)

6.989

GRAVY (calculated)

0.014

Length

568 amino acids

Sequence
(BLAST)

001: MHSVSISASA SASAIASGGA RSKAAAGRRP SEIRFCGLRG DALACGSLRA SHAAAATSRA VLRAASANGA AGSGDGFDYD LVIIGAGVGG HGAALHAVEE
101: GLKTAIIEGD VVGGTCVNRG CVPSKALLAV SGRMRELHDE HHMKSLGLQV SSTGYDRQAV ADHANNLASK IRSNLTNSMK AMGVDILTGF GKIVGKQRVR
201: YGKVGFPEKE ITAKNIIIAT GSVPFVPKGI EIDGKTVFTS DHALKLESVP DWIAIVGSGY IGLEFSDVYT ALGSEVTFVE ALDQLMPGFD PEIAKLAQRV
301: LINTRKIDYH TGVFASKITP AKDGKPVLIE LIDAKTKEHK ETLEVDAALI ATGRAPFTSG LGLENINVVT QRGFIPVDER MQVTDADGNV VPNLFCIGDA
401: NGKLMLAHAA SAQGISVVEQ ISGRDHILNH LSIPAACFTH PEISMVGLTE PQAREKADNE GFEVSVVKTS FKANTKALAE NEGDGIAKMI YRPDTGEILG
501: VHILGLHAAD LIHEASNAIA LGTRLQELKL AVHAHPTLSE VLDELFKAAK LQPKDGRSAS QIIHPSRS

Best Arabidopsis Sequence Match ( AT4G16155.1 )
(BLAST)

001: MQSVLSLSFS QASLPLANRT LCSSNAAPST PRNLRFCGLR REAFCFSPSK QLTSCRFHIQ SRRIEVSAAA SSSAGNGAPS KSFDYDLIII GAGVGGHGAA
101: LHAVEKGLKT AIIEGDVVGG TCVNRGCVPS KALLAVSGRM RELQNEHHMK AFGLQVSAAG YDRQGVADHA SNLATKIRNN LTNSMKALGV DILTGFGAVL
201: GPQKVKYGDN IITGKDIIIA TGSVPFVPKG IEVDGKTVIT SDHALKLESV PDWIAIVGSG YIGLEFSDVY TALGSEVTFI EALDQLMPGF DPEISKLAQR
301: VLINTRKIDY HTGVFASKIT PAKDGKPVLI ELIDAKTKEP KDTLEVDAAL IATGRAPFTN GLGLENINVT TQRGFIPVDE RMRVIDGNGK LVPHLYCIGD
401: ANGKLMLAHA ASAQGISVVE QVTGRDHVLN HLSIPAACFT HPEISMVGLT EPQAREKAEK EGFKVSIAKT SFKANTKALA ENEGEGLAKM IYRPDNGEIL
501: GVHIFGLHAA DLIHEASNAI ALGTRIQDIK LAVHAHPTLS EVVDELFKAA KVDSPASVTA QSVKVTV

Arabidopsis Description

LPD2Dihydrolipoyl dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JLP5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.