Factsheet for Os05t0156700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
YLoc:	mitochondrion

plastid: 17189339
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069988	Potato	cytosol	59.23	81.66
KRH37006	Soybean	cytosol	85.84	59.0
CDY09711	Canola	plasma membrane	72.53	44.59
EES19070	Sorghum	plastid	97.0	40.21
Os01t0337900-01	Rice	plastid	95.28	39.57
TraesCS1A01G099500.2	Wheat	plastid	90.13	36.97
Zm00001d009779_P002	Maize	plastid	91.42	36.41
HORVU1Hr1G023060.8	Barley	plastid	90.13	36.02
KRH11978	Soybean	endoplasmic reticulum, nucleus	86.7	35.75
CDY32221	Canola	plastid	84.12	35.7
TraesCS1D01G107400.1	Wheat	plastid	90.13	35.65
TraesCS1B01G124900.1	Wheat	plastid	90.13	35.65
PGSC0003DMT400069799	Potato	mitochondrion, plastid	86.7	35.44
CDY34436	Canola	plastid	83.26	35.4
VIT_05s0077g01210.t01	Wine grape	plastid	86.7	35.38
Solyc05g053100.2.1	Tomato	nucleus	86.27	35.2
Bra033540.1-P	Field mustard	plastid	84.12	34.81
GSMUA_Achr3P12660_001	Banana	plastid	84.12	34.57
KRH02332	Soybean	endoplasmic reticulum, nucleus	84.12	34.39
AT4G16155.1	Thale cress	plastid	83.26	34.22
CDX90541	Canola	extracellular, nucleus, peroxisome	30.04	33.65
Bra012738.1-P	Field mustard	peroxisome	30.04	33.65
CDX75895	Canola	plastid	85.41	32.25
CDX82387	Canola	plastid	85.41	32.2
Bra001645.1-P	Field mustard	plastid	85.41	32.2
AT3G16950.2	Thale cress	plastid	84.98	31.78
KRH50756	Soybean	endoplasmic reticulum, nucleus	85.41	31.64
Os01t0328700-01	Rice	mitochondrion	34.33	15.9
Os02t0813500-01	Rice	cytosol, plasma membrane	24.03	11.29
Os03t0163300-01	Rice	plastid	25.75	10.81
Os10t0415300-02	Rice	plastid	22.75	9.57
CDX93023	Canola	cytosol, mitochondrion	0.43	1.47
GSMUA_Achr1P18490_001	Banana	plastid	0.0	0.0

Protein Annotations

Gene3D:3.30.390.30	Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A0P0WIG6	ProteinID:BAS92367.1	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0050660	GO:GO:0055114
InterPro:IPR016156	InterPro:IPR036188	EnsemblPlantsGene:Os05g0156700	EnsemblPlants:Os05t0156700-01	PFAM:PF02852	PFAM:PF07992
PRINTS:PR00411	PANTHER:PTHR22912	PANTHER:PTHR22912:SF196	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424
UniParc:UPI0003938C49	:	:	:	:	:

Description

Similar to Dihydrolipoyl dehydrogenase. (Os05t0156700-01)

Coordinates

chr5:-:3313455..3315712

Molecular Weight (calculated)

24850.7 Da

IEP (calculated)

5.939

GRAVY (calculated)

-0.047

Length

233 amino acids

Sequence
(BLAST)

001: DAKTKEHKET LEVDAALIAT GRAPFTKGLG LENINVVTQR GFIPVDERMR VMDADGNVVP NLYCIGDANG KLMLAHAASA QGISVVEQIS GRDHILNHLS
101: IPAACFTHPE ISMVGLTEPQ AREKADKEGF EISVVKTSFK ANTKALAENE GDGLAKLIYR PDTGEILGVH ILGLHAADLI HEASNAIALG TRLQDIKFAV
201: HAHPTLSEVL DELFKAAKVN SGVSHSVNEP VAA

Best Arabidopsis Sequence Match ( AT3G16950.1 )
(BLAST)

001: MQSAMALSFS QTSFTRPNHV LGSSGSVFST PRSLRFCGLR REAFGFSTSN QLAIRSNRIQ FLSRKSFQVS ASASSNGNGA PPKSFDYDLI IIGAGVGGHG
101: AALHAVEKGL KTAIIEGDVV GGTCVNRGCV PSKALLAVSG RMRELQNEHH MKSFGLQVSA AGYDRQGVAD HANNLATKIR NNLTNSMKAI GVDILTGFGS
201: VLGPQKVKYG KDNIITAKDI IIATGSVPFV PKGIEVDGKT VITSDHALKL ESVPEWIAIV GSGYIGLEFS DVYTALGSEV TFIEALDQLM PGFDPEISKL
301: AQRVLINPRK IDYHTGVFAS KITPARDGKP VLIELIDAKT KEPKDTLEVD AALIATGRAP FTNGLGLENV NVVTQRGFIP VDERMRVIDG KGTLVPNLYC
401: IGDANGKLML AHAASAQGIS VVEQVSGRDH VLNHLSIPAA CFTHPEISMV GLTEPQAKEK GEKEGFKVSV VKTSFKANTK ALAENEGEGI AKMIYRPDNG
501: EILGVHIFGL HAADLIHEAS NAIALGTRIQ DIKLAVHAHP TLSEVLDELF KAAKVESHAT TRTVSEKVVV

Arabidopsis Description

LPD1Dihydrolipoyl dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A8MS68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.