Factsheet for Os01t0337900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 17189339
plastid: 21433289
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0156700-01	Rice	plastid	39.57	95.28
KXG32441	Sorghum	plastid	90.73	90.73
Zm00001d009212_P004	Maize	extracellular	90.02	82.25
GSMUA_Achr3P12660_001	Banana	plastid	82.17	81.31
CDY32221	Canola	plastid	78.25	79.96
VIT_05s0077g01210.t01	Wine grape	plastid	81.28	79.86
CDY34436	Canola	plastid	77.9	79.74
PGSC0003DMT400069988	Potato	cytosol	23.89	79.29
Bra033540.1-P	Field mustard	plastid	79.5	79.22
KRH02332	Soybean	endoplasmic reticulum, nucleus	79.5	78.25
KRH11978	Soybean	endoplasmic reticulum, nucleus	78.79	78.23
AT4G16155.1	Thale cress	plastid	78.61	77.78
Solyc05g053100.2.1	Tomato	nucleus	77.9	76.53
PGSC0003DMT400069799	Potato	mitochondrion, plastid	77.72	76.49
KRH37006	Soybean	cytosol	44.56	73.75
CDX82387	Canola	plastid	80.39	72.98
CDX75895	Canola	plastid	80.21	72.93
Bra001645.1-P	Field mustard	plastid	80.04	72.65
AT3G16950.2	Thale cress	plastid	80.21	72.23
KRH50756	Soybean	endoplasmic reticulum, nucleus	79.14	70.59
GSMUA_Achr1P18490_001	Banana	plastid	35.47	70.07
CDY09711	Canola	plasma membrane	41.35	61.21
Bra012738.1-P	Field mustard	peroxisome	22.64	61.06
CDX90541	Canola	extracellular, nucleus, peroxisome	22.46	60.58
Os01t0328700-01	Rice	mitochondrion	30.66	34.19
Os03t0163300-01	Rice	plastid	28.16	28.47
Os10t0415300-02	Rice	plastid	27.09	27.44
Os02t0813500-01	Rice	cytosol, plasma membrane	23.53	26.61
CDX93023	Canola	cytosol, mitochondrion	2.32	19.12

Protein Annotations

KEGG:00010+1.8.1.4	KEGG:00020+1.8.1.4	KEGG:00260+1.8.1.4	KEGG:00280+1.8.1.4	KEGG:00620+1.8.1.4	KEGG:00640+1.8.1.4
Gene3D:3.30.390.30	Gene3D:3.50.50.60	EntrezGene:4326849	MapMan:5.1.2.2.3	EMBL:AK120645	ProteinID:BAB63876.1
ProteinID:BAF04855.1	ProteinID:BAS71953.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166
GO:GO:0000930	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0004148	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005874	GO:GO:0006091	GO:GO:0007017	GO:GO:0007020	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0016668	GO:GO:0016787
GO:GO:0019725	GO:GO:0022900	GO:GO:0031122	GO:GO:0045454	GO:GO:0050660	GO:GO:0055114
InterPro:IPR016156	InterPro:IPR036188	InterPro:Lipoamide_DH	EnsemblPlantsGene:Os01g0337900	EnsemblPlants:Os01t0337900-01	PFAM:PF02852
PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR22912
PANTHER:PTHR22912:SF196	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase	InterPro:Pyr_nucl-diS_OxRdtase_dimer	UniProt:Q94CN9	SUPFAM:SSF51905
SUPFAM:SSF55424	TIGRFAMs:TIGR01350	UniParc:UPI000009D3C3	RefSeq:XP_015625013.1	SEG:seg	:

Description

Similar to Dihydrolipoamide dehydrogenase. (Os01t0337900-01)

Coordinates

chr1:+:13272614..13282008

Molecular Weight (calculated)

58848.9 Da

IEP (calculated)

6.995

GRAVY (calculated)

0.051

Length

561 amino acids

Sequence
(BLAST)

001: MYSTAISLSA AATAAAAVGG ARPGAIRPAE LRFCGLRREA LGLRSLRAPP RAAATPRKAA AATGNGAAGS GGFDYDLVII GAGVGGHGAA LHAVEKGLKT
101: AIIEGDVVGG TCVNRGCVPS KALLAVSGRM RELQDEHHMK SLGLQVSTAG YDRQAVADHA NNLASKIRSN LTNSMKALGV DILTGFGTIV GKQKVRYGKV
201: GFPDNEITAR NIIIATGSVP FVPNGIEIDG KTVFTSDHAL KLESVPDWIA IVGSGYIGLE FSDVYTALGS EVTFVEALDQ LMPGFDPEIA KLAQRILINP
301: RKIDYHTGVF ASKITPAKDG KPVLIELIDA KTKEHKETLE VDAALIATGR APFTKGLGLE NVNVVTQRGF VPVDERMQVM DADGNAVPNL YCIGDANGKL
401: MLAHAASAQG ISVVERISGK DNILNHLSIP AACFTHPEIS MVGLTEPQAR EKADKEGFEI SVVKTSFKAN TKALAENEGD GLAKMIYRPD TGEILGVHIL
501: GLHAADLIHE ASNAIALGTR VQDIKFAVHA HPTLSEVLDE LFKAAKVNAG VPHSVNEPVA A

Best Arabidopsis Sequence Match ( AT3G16950.1 )
(BLAST)

001: MQSAMALSFS QTSFTRPNHV LGSSGSVFST PRSLRFCGLR REAFGFSTSN QLAIRSNRIQ FLSRKSFQVS ASASSNGNGA PPKSFDYDLI IIGAGVGGHG
101: AALHAVEKGL KTAIIEGDVV GGTCVNRGCV PSKALLAVSG RMRELQNEHH MKSFGLQVSA AGYDRQGVAD HANNLATKIR NNLTNSMKAI GVDILTGFGS
201: VLGPQKVKYG KDNIITAKDI IIATGSVPFV PKGIEVDGKT VITSDHALKL ESVPEWIAIV GSGYIGLEFS DVYTALGSEV TFIEALDQLM PGFDPEISKL
301: AQRVLINPRK IDYHTGVFAS KITPARDGKP VLIELIDAKT KEPKDTLEVD AALIATGRAP FTNGLGLENV NVVTQRGFIP VDERMRVIDG KGTLVPNLYC
401: IGDANGKLML AHAASAQGIS VVEQVSGRDH VLNHLSIPAA CFTHPEISMV GLTEPQAKEK GEKEGFKVSV VKTSFKANTK ALAENEGEGI AKMIYRPDNG
501: EILGVHIFGL HAADLIHEAS NAIALGTRIQ DIKLAVHAHP TLSEVLDELF KAAKVESHAT TRTVSEKVVV

Arabidopsis Description

LPD1Dihydrolipoyl dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A8MS68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.